Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 RPL7P24-201ENST00000493052 752 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 RPL23AP55-201ENST00000498163 452 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 OR5H5P-201ENST00000503164 928 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 HMGB1P28-201ENST00000507778 552 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 NDUFB4P9-201ENST00000511646 388 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 AP001372.4-201ENST00000524889 472 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 AC120057.2-201ENST00000571520 271 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 AL451086.1-201ENST00000605596 223 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 AC092650.2-201ENST00000619984 902 ntBASIC3.61□□□□□ -1.83
UBQLN3Q9H347 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.61□□□□□ -1.83
UBQLN3Q9H347 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
UBQLN3Q9H347 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
UBQLN3Q9H347 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
UBQLN3Q9H347 MIR423-201ENST00000362201 94 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 Y_RNA.192-201ENST00000363977 102 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 RNU6-730P-201ENST00000383954 104 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 RNU6-761P-201ENST00000384148 107 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 TAF9BP1-201ENST00000396646 746 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 RPL32P23-201ENST00000397237 405 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 RPL31P1-201ENST00000398116 372 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 RPL36AP36-201ENST00000418616 301 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 FNDC3CP-201ENST00000420795 1155 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AC083863.1-201ENST00000438811 231 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AC122718.1-201ENST00000439448 744 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AC239367.2-201ENST00000447309 705 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AL359073.1-201ENST00000448036 403 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AL500522.2-201ENST00000448562 343 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.6□□□□□ -1.83
UBQLN3Q9H347 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.6□□□□□ -1.83
UBQLN3Q9H347 FAM133DP-201ENST00000464802 691 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 MTND1P16-201ENST00000465177 898 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AC108729.1-201ENST00000487812 947 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AC116353.3-201ENST00000511215 249 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 RNA5SP179-201ENST00000517284 121 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AC008802.1-201ENST00000519121 791 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AL139174.1-201ENST00000531489 886 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.6□□□□□ -1.83
UBQLN3Q9H347 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AC125611.1-201ENST00000549563 229 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AC090695.1-201ENST00000561269 1222 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AC244505.7-201ENST00000599675 272 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AC091167.4-201ENST00000605079 184 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AC131235.4-201ENST00000609288 620 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AC012531.5-201ENST00000611375 151 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AC109809.1-201ENST00000619665 545 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AC116618.1-201ENST00000634617 774 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.6□□□□□ -1.83
UBQLN3Q9H347 GDI2P1-201ENST00000429312 1336 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.6□□□□□ -1.83
UBQLN3Q9H347 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
UBQLN3Q9H347 AP001350.1-201ENST00000601906 1524 ntBASIC3.6□□□□□ -1.83
UBQLN3Q9H347 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
UBQLN3Q9H347 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
UBQLN3Q9H347 AF127577.6-201ENST00000623352 2191 ntBASIC3.59□□□□□ -1.83
UBQLN3Q9H347 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
UBQLN3Q9H347 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.59□□□□□ -1.83
UBQLN3Q9H347 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.59□□□□□ -1.83
UBQLN3Q9H347 NCAPGP1-201ENST00000505112 1814 ntBASIC3.59□□□□□ -1.83
UBQLN3Q9H347 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.59□□□□□ -1.83
UBQLN3Q9H347 SNRPEP3-201ENST00000338402 276 ntBASIC3.59□□□□□ -1.83
UBQLN3Q9H347 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
UBQLN3Q9H347 RNU6-989P-201ENST00000362756 107 ntBASIC3.59□□□□□ -1.83
UBQLN3Q9H347 RNU6-1122P-201ENST00000384449 107 ntBASIC3.59□□□□□ -1.83
UBQLN3Q9H347 MIR513B-201ENST00000385136 84 ntBASIC3.59□□□□□ -1.83
UBQLN3Q9H347 MIR1183-201ENST00000408856 89 ntBASIC3.59□□□□□ -1.83
UBQLN3Q9H347 AC068533.2-201ENST00000411872 306 ntBASIC3.59□□□□□ -1.83
UBQLN3Q9H347 RPL7AP73-201ENST00000413490 353 ntBASIC3.59□□□□□ -1.83
UBQLN3Q9H347 CRYBB2P1-203ENST00000415709 538 ntBASIC3.59□□□□□ -1.83
UBQLN3Q9H347 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.59□□□□□ -1.83
UBQLN3Q9H347 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
UBQLN3Q9H347 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.59□□□□□ -1.83
UBQLN3Q9H347 RPL21P66-201ENST00000426566 466 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms