Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL157700.1-201ENST00000561973 1432 ntBASIC3.18□□□□□ -1.9
TRIM4Q9C037 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM4Q9C037 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM4Q9C037 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM4Q9C037 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM4Q9C037 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM4Q9C037 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM4Q9C037 SNORA44-201ENST00000384584 132 ntBASIC3.17□□□□□ -1.9
TRIM4Q9C037 AL138885.1-201ENST00000405921 675 ntBASIC3.17□□□□□ -1.9
TRIM4Q9C037 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM4Q9C037 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM4Q9C037 ETF1P3-201ENST00000430422 1160 ntBASIC3.17□□□□□ -1.9
TRIM4Q9C037 AC109583.1-201ENST00000432156 268 ntBASIC3.17□□□□□ -1.9
TRIM4Q9C037 RPL31P13-201ENST00000484151 370 ntBASIC3.17□□□□□ -1.9
TRIM4Q9C037 AC098799.2-201ENST00000509466 868 ntBASIC3.17□□□□□ -1.9
TRIM4Q9C037 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.17□□□□□ -1.9
TRIM4Q9C037 RNU4-18P-201ENST00000516751 149 ntBASIC3.17□□□□□ -1.9
TRIM4Q9C037 RNU6-56P-201ENST00000516986 93 ntBASIC3.17□□□□□ -1.9
TRIM4Q9C037 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.17□□□□□ -1.9
TRIM4Q9C037 AC087276.1-201ENST00000529659 480 ntBASIC3.17□□□□□ -1.9
TRIM4Q9C037 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM4Q9C037 AL121603.1-201ENST00000553815 142 ntBASIC3.17□□□□□ -1.9
TRIM4Q9C037 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.17□□□□□ -1.9
TRIM4Q9C037 RPL23AP61-201ENST00000623642 466 ntBASIC3.17□□□□□ -1.9
TRIM4Q9C037 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.17□□□□□ -1.9
TRIM4Q9C037 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.17□□□□□ -1.9
TRIM4Q9C037 DDX6P1-205ENST00000441966 1436 ntBASIC3.17□□□□□ -1.9
TRIM4Q9C037 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.17□□□□□ -1.9
TRIM4Q9C037 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM4Q9C037 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TRIM4Q9C037 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM4Q9C037 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM4Q9C037 HSPA8P19-201ENST00000505359 1517 ntBASIC3.16□□□□□ -1.9
TRIM4Q9C037 CR383658.2-201ENST00000547576 1525 ntBASIC3.16□□□□□ -1.9
TRIM4Q9C037 RNU1-70P-201ENST00000362618 164 ntBASIC3.16□□□□□ -1.9
TRIM4Q9C037 SNORD65-201ENST00000391079 73 ntBASIC3.16□□□□□ -1.9
TRIM4Q9C037 AC004987.3-201ENST00000413879 771 ntBASIC3.16□□□□□ -1.9
TRIM4Q9C037 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM4Q9C037 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM4Q9C037 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM4Q9C037 SAR1AP4-201ENST00000429225 591 ntBASIC3.16□□□□□ -1.9
TRIM4Q9C037 ATP5C1P1-201ENST00000441945 895 ntBASIC3.16□□□□□ -1.9
TRIM4Q9C037 OR6K1P-201ENST00000456766 971 ntBASIC3.16□□□□□ -1.9
TRIM4Q9C037 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM4Q9C037 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM4Q9C037 RPL30P11-201ENST00000495304 339 ntBASIC3.16□□□□□ -1.9
TRIM4Q9C037 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.16□□□□□ -1.9
TRIM4Q9C037 AC112198.1-201ENST00000505369 1220 ntBASIC3.16□□□□□ -1.9
TRIM4Q9C037 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.16□□□□□ -1.9
TRIM4Q9C037 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM4Q9C037 AC010928.3-201ENST00000587712 541 ntBASIC3.16□□□□□ -1.9
TRIM4Q9C037 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.16□□□□□ -1.9
TRIM4Q9C037 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM4Q9C037 MTCO2P22-201ENST00000603246 681 ntBASIC3.16□□□□□ -1.9
TRIM4Q9C037 AF117829.1-206ENST00000621883 3802 ntBASIC3.16□□□□□ -1.9
TRIM4Q9C037 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.16□□□□□ -1.9
TRIM4Q9C037 AC006065.5-201ENST00000623427 349 ntBASIC3.16□□□□□ -1.9
TRIM4Q9C037 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
TRIM4Q9C037 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.15□□□□□ -1.9
TRIM4Q9C037 AL353743.4-201ENST00000422653 1547 ntBASIC3.15□□□□□ -1.9
TRIM4Q9C037 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
TRIM4Q9C037 AC017071.1-201ENST00000564407 2204 ntBASIC3.15□□□□□ -1.9
TRIM4Q9C037 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM4Q9C037 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TRIM4Q9C037 RNU1-140P-201ENST00000365040 165 ntBASIC3.15□□□□□ -1.91
TRIM4Q9C037 RNA5SP229-201ENST00000410809 99 ntBASIC3.15□□□□□ -1.91
TRIM4Q9C037 AC004022.2-201ENST00000413824 193 ntBASIC3.15□□□□□ -1.91
TRIM4Q9C037 AC063979.1-201ENST00000415539 377 ntBASIC3.15□□□□□ -1.91
TRIM4Q9C037 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM4Q9C037 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.15□□□□□ -1.91
TRIM4Q9C037 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM4Q9C037 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM4Q9C037 RPL23AP20-201ENST00000447965 421 ntBASIC3.15□□□□□ -1.91
TRIM4Q9C037 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.15□□□□□ -1.91
TRIM4Q9C037 RPL5P13-201ENST00000462840 709 ntBASIC3.15□□□□□ -1.91
TRIM4Q9C037 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC3.15□□□□□ -1.91
TRIM4Q9C037 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM4Q9C037 ARL4AP2-201ENST00000507378 601 ntBASIC3.15□□□□□ -1.91
TRIM4Q9C037 RNA5SP76-201ENST00000516277 87 ntBASIC3.15□□□□□ -1.91
TRIM4Q9C037 RN7SKP82-201ENST00000516786 223 ntBASIC3.15□□□□□ -1.91
TRIM4Q9C037 AP001207.2-201ENST00000519490 539 ntBASIC3.15□□□□□ -1.91
TRIM4Q9C037 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.15□□□□□ -1.91
TRIM4Q9C037 OR4R3P-201ENST00000525084 838 ntBASIC3.15□□□□□ -1.91
TRIM4Q9C037 PTP4A1P6-201ENST00000531034 478 ntBASIC3.15□□□□□ -1.91
TRIM4Q9C037 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM4Q9C037 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM4Q9C037 MTCO3P24-201ENST00000572729 782 ntBASIC3.15□□□□□ -1.91
TRIM4Q9C037 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.15□□□□□ -1.91
TRIM4Q9C037 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.15□□□□□ -1.91
TRIM4Q9C037 AC105429.2-201ENST00000610567 517 ntBASIC3.15□□□□□ -1.91
TRIM4Q9C037 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
TRIM4Q9C037 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC3.15□□□□□ -1.91
TRIM4Q9C037 AC004925.1-201ENST00000624256 2706 ntBASIC3.14□□□□□ -1.91
TRIM4Q9C037 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.14□□□□□ -1.91
TRIM4Q9C037 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
TRIM4Q9C037 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.14□□□□□ -1.91
TRIM4Q9C037 MIR153-1-201ENST00000384914 90 ntBASIC3.14□□□□□ -1.91
TRIM4Q9C037 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.14□□□□□ -1.91
TRIM4Q9C037 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.14□□□□□ -1.91
TRIM4Q9C037 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms