Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 MTCO3P44-201ENST00000510977 541 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AC093677.1-201ENST00000514414 678 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 HIGD1AP3-201ENST00000515857 278 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 DYNLL1P4-201ENST00000549314 266 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 UBE2FP2-201ENST00000566646 462 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 OR1F2P-201ENST00000570470 933 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 HNRNPCP4-201ENST00000571636 900 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 RN7SL176P-201ENST00000580352 264 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AC209154.1-201ENST00000582156 337 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 RPL7P50-201ENST00000600588 727 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AC233280.2-201ENST00000603917 1070 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AC115621.1-201ENST00000604653 858 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AP003117.2-201ENST00000606010 545 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AC104010.1-201ENST00000616889 150 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AL596245.1-201ENST00000618994 362 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 MIR6719-201ENST00000622428 87 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 U3.53-201ENST00000628922 216 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 AC074029.4-201ENST00000624796 1859 ntBASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TRIM54Q9BYV2 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 CCT4P2-201ENST00000233836 1548 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 OR51H2P-202ENST00000641424 3046 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 RNU6-339P-201ENST00000384310 107 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 Y_RNA.608-201ENST00000410647 95 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 RN7SKP33-201ENST00000410942 340 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 ELOCP17-201ENST00000414751 326 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 AC010975.2-201ENST00000427781 588 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 AC091862.1-201ENST00000438016 1100 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 AL022238.1-201ENST00000442557 355 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 AC244505.5-201ENST00000443639 207 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 FAM103A2P-201ENST00000444122 354 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 ISCUP1-201ENST00000454451 448 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 RPS20P32-201ENST00000456044 356 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 SRRM1P2-201ENST00000464531 1192 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 RPS23P1-201ENST00000491662 432 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 RNU6-714P-201ENST00000516963 103 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 IGKV2D-36-201ENST00000518643 226 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 IGKV1-32-201ENST00000519290 311 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 OR8L1P-201ENST00000534005 955 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 AP001094.1-201ENST00000579805 193 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 AL021997.1-201ENST00000605757 193 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 AC138749.5-201ENST00000611461 208 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 AP001506.1-201ENST00000615444 211 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 AC116165.2-201ENST00000616705 206 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 AL391684.1-202ENST00000641293 1636 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 AL139811.1-201ENST00000424779 2299 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 AL359893.1-201ENST00000447628 1580 ntBASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TRIM54Q9BYV2 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.51□□□□□ -1.69
TRIM54Q9BYV2 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms