Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VRK1Q99986 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
VRK1Q99986 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VRK1Q99986 A2MP1-204ENST00000566278 4130 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VRK1Q99986 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.47□□□□□ -1.69
VRK1Q99986 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
VRK1Q99986 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
VRK1Q99986 Y_RNA.9-201ENST00000362354 101 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 MIR153-1-201ENST00000384914 90 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AC013442.1-201ENST00000397347 228 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AL049693.1-201ENST00000402760 611 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 CCNG1P1-201ENST00000406783 885 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.47□□□□□ -1.69
VRK1Q99986 AC127391.1-201ENST00000411737 98 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.47□□□□□ -1.69
VRK1Q99986 RPL36AP10-201ENST00000421785 322 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.47□□□□□ -1.69
VRK1Q99986 RPL7P57-201ENST00000423238 740 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AC133104.1-201ENST00000429100 218 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AC104850.1-201ENST00000435940 476 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AL451074.3-201ENST00000437709 472 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.47□□□□□ -1.69
VRK1Q99986 RPL23AP33-201ENST00000442301 452 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AL590399.6-201ENST00000446396 307 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AC013267.1-201ENST00000458227 267 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AC053481.1-201ENST00000467217 306 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 HMGB1P25-201ENST00000468402 607 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 THAP6-203ENST00000502620 582 ntTSL 3 BASIC4.47□□□□□ -1.69
VRK1Q99986 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.47□□□□□ -1.69
VRK1Q99986 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VRK1Q99986 PGBD4P4-201ENST00000509673 613 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 RNU6-718P-201ENST00000516166 105 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 RNA5SP464-201ENST00000516251 108 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AC107934.1-201ENST00000522215 217 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 FAM92A1P1-201ENST00000528023 890 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC4.47□□□□□ -1.69
VRK1Q99986 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.47□□□□□ -1.69
VRK1Q99986 AL845331.3-202ENST00000562856 261 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AC107954.1-201ENST00000565906 727 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AC234778.2-201ENST00000566241 354 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AC092325.1-201ENST00000566449 554 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC4.47□□□□□ -1.69
VRK1Q99986 ELOCP28-201ENST00000590044 317 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AL669831.4-202ENST00000590817 238 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.47□□□□□ -1.69
VRK1Q99986 AC068790.3-201ENST00000602988 553 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AC024940.4-201ENST00000605507 246 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AC010424.2-201ENST00000607594 443 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AL161734.1-201ENST00000609720 557 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AL133173.2-201ENST00000614270 90 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 AC009704.2-201ENST00000618739 483 ntBASIC4.47□□□□□ -1.69
VRK1Q99986 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC4.47□□□□□ -1.69
VRK1Q99986 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.47□□□□□ -1.69
VRK1Q99986 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VRK1Q99986 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VRK1Q99986 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
VRK1Q99986 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VRK1Q99986 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
VRK1Q99986 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VRK1Q99986 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
VRK1Q99986 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.47□□□□□ -1.69
VRK1Q99986 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
VRK1Q99986 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
VRK1Q99986 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.47□□□□□ -1.69
VRK1Q99986 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.46□□□□□ -1.69
VRK1Q99986 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.46□□□□□ -1.69
VRK1Q99986 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.46□□□□□ -1.69
VRK1Q99986 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC4.46□□□□□ -1.69
VRK1Q99986 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.46□□□□□ -1.69
VRK1Q99986 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.46□□□□□ -1.7
VRK1Q99986 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.46□□□□□ -1.7
VRK1Q99986 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
VRK1Q99986 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
VRK1Q99986 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VRK1Q99986 RNU6-989P-201ENST00000362756 107 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 RNU4-1-201ENST00000363925 141 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 Y_RNA.548-201ENST00000384656 105 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
VRK1Q99986 MIR550A3-201ENST00000390735 95 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 RNU4-55P-201ENST00000410731 137 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.46□□□□□ -1.7
VRK1Q99986 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.46□□□□□ -1.7
VRK1Q99986 DPPA2P1-201ENST00000428060 556 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 LAMTOR3P1-201ENST00000428620 370 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.46□□□□□ -1.7
VRK1Q99986 RPL31P35-201ENST00000431058 377 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 MTCO2P11-201ENST00000431069 680 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 AC093019.2-201ENST00000432294 384 ntTSL 3 BASIC4.46□□□□□ -1.7
VRK1Q99986 AC000111.3-201ENST00000433478 193 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
VRK1Q99986 AL596276.1-201ENST00000434465 418 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 RPL35AP21-201ENST00000437667 333 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.46□□□□□ -1.7
VRK1Q99986 MTATP6P30-201ENST00000443540 664 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 CEACAMP6-201ENST00000452007 574 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 MTCO2P29-201ENST00000465212 189 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 AL672167.3-201ENST00000465951 960 ntBASIC4.46□□□□□ -1.7
VRK1Q99986 AL121769.1-201ENST00000469473 401 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms