Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL590762.2-201ENST00000395798 571 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 SNRPEP2-201ENST00000397592 279 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AC092745.2-202ENST00000411880 369 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 FCF1P2-201ENST00000415284 583 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AL590609.2-201ENST00000421430 368 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AL009174.1-201ENST00000426577 416 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 ISCA1P6-201ENST00000427740 390 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 TIMM9P3-201ENST00000428659 274 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 FTH1P16-201ENST00000435241 552 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AC093716.1-201ENST00000435923 377 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 ACTR3P2-201ENST00000439585 1257 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 PTMAP3-201ENST00000447474 330 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AC108463.1-201ENST00000450258 347 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AC090142.1-201ENST00000465776 462 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 HMGB1P29-201ENST00000505659 499 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 RNU6-1281P-201ENST00000516223 105 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AC239860.2-201ENST00000525886 270 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 BNIP3P1-201ENST00000547295 580 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AC136618.2-201ENST00000575091 400 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 RN7SL52P-201ENST00000584271 284 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AL596327.1-201ENST00000603629 213 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AC007363.1-201ENST00000604736 620 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 RN7SL722P-201ENST00000617780 284 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 RN7SL565P-201ENST00000618246 284 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AC243756.2-201ENST00000618406 463 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AC022106.2-201ENST00000620114 757 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AC009268.2-201ENST00000621925 457 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AC091905.1-201ENST00000624400 311 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AL136164.3-201ENST00000624429 3978 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 AC100778.3-201ENST00000580060 1750 ntBASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CDK5RAP1Q96SZ6 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 ZNF137P-201ENST00000456718 1920 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 RNU6-845P-201ENST00000362578 103 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 RNU6-1085P-201ENST00000363576 107 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 RNU6-767P-201ENST00000384132 107 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AL034403.1-201ENST00000399414 885 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 RPS24P12-201ENST00000402084 394 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AP000580.1-201ENST00000404439 358 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AL161631.1-201ENST00000417933 486 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AC140479.3-201ENST00000418944 1126 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AC114814.2-201ENST00000419195 485 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 GAPDHP49-201ENST00000421421 961 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AL353193.1-201ENST00000421444 268 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AL353678.1-201ENST00000422735 741 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 RGS17P1-201ENST00000423358 553 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 GTF2IP20-201ENST00000431663 360 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 BTF3P6-201ENST00000448054 499 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AL590365.1-201ENST00000450788 243 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AC079168.2-201ENST00000453977 416 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 PSMC1P13-201ENST00000458195 985 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 RPS20P20-201ENST00000460498 340 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AC093249.4-201ENST00000564755 259 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AC141257.3-201ENST00000572906 215 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 CYCSP40-201ENST00000575927 294 ntBASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.92□□□□□ -1.62
CDK5RAP1Q96SZ6 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms