Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC092125.1-201ENST00000562568 1995 ntBASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 AP001284.1-201ENST00000528393 2118 ntBASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 USP9YP4-201ENST00000424401 1745 ntBASIC5.83□□□□□ -1.48
SYNGAP1Q96PV0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 SDAD1P1-202ENST00000524156 2051 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 RNU6-444P-201ENST00000383988 108 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 SNORA66-201ENST00000384792 133 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 SNORA57.1-201ENST00000391227 145 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 CD3D-202ENST00000392884 476 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 BTBD10P2-201ENST00000404779 676 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 AC004987.3-201ENST00000413879 771 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 AC007283.2-201ENST00000424739 197 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 RPL36AP53-201ENST00000432891 316 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 AC002381.1-201ENST00000447049 280 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 SLC25A18P1-201ENST00000449385 454 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 MRPS17P3-201ENST00000465453 385 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 RPL7P22-201ENST00000466005 733 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 RNU6-488P-201ENST00000515918 99 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 RN7SKP13-201ENST00000515933 244 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 RNA5SP43-201ENST00000516559 110 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 PSMA2P1-201ENST00000526365 646 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 AC087241.2-201ENST00000535801 324 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 AC093249.1-201ENST00000567049 203 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 MIR4270-201ENST00000581799 70 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 VN1R84P-201ENST00000593697 235 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 AC011626.1-201ENST00000604710 562 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 BX664608.1-201ENST00000610519 487 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 AC105429.2-201ENST00000610567 517 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 U6.101-201ENST00000637707 76 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 AC105074.1-201ENST00000623380 3095 ntBASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.82□□□□□ -1.48
SYNGAP1Q96PV0 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 MIR589-201ENST00000385238 99 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AL031679.1-201ENST00000400616 525 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 MTND3P8-201ENST00000412909 339 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 RPS7P15-201ENST00000415804 584 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AC119751.6-201ENST00000416712 186 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 MTCO3P46-201ENST00000425787 232 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 IFNA20P-201ENST00000436840 528 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 RNU7-63P-201ENST00000459054 62 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 RPL21P71-201ENST00000465598 459 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 PCBP2P3-201ENST00000509726 843 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AC110792.2-201ENST00000510278 224 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AC112206.3-201ENST00000514578 389 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 RNU6-201P-201ENST00000517100 61 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 OR4R1P-201ENST00000529879 463 ntBASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC5.81□□□□□ -1.48
SYNGAP1Q96PV0 AL389895.1-201ENST00000554127 252 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 196.3 ms