Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 AC006111.3-201ENST00000622137 383 ntBASIC2.23□□□□□ -2.05
AP1S3Q96PC3 AC099506.2-201ENST00000623074 221 ntBASIC2.23□□□□□ -2.05
AP1S3Q96PC3 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.23□□□□□ -2.05
AP1S3Q96PC3 AL034408.1-202ENST00000636088 415 ntBASIC2.23□□□□□ -2.05
AP1S3Q96PC3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.23□□□□□ -2.05
AP1S3Q96PC3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
AP1S3Q96PC3 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
AP1S3Q96PC3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
AP1S3Q96PC3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC2.23□□□□□ -2.05
AP1S3Q96PC3 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
AP1S3Q96PC3 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.22□□□□□ -2.05
AP1S3Q96PC3 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
AP1S3Q96PC3 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
AP1S3Q96PC3 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
AP1S3Q96PC3 RPL9P7-201ENST00000330965 580 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 SNORD15B-201ENST00000384714 146 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
AP1S3Q96PC3 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
AP1S3Q96PC3 RN7SKP220-201ENST00000410611 288 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 CYCSP19-201ENST00000411715 316 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 HMGN2P35-201ENST00000412164 270 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 BX682237.1-201ENST00000415016 335 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.22□□□□□ -2.05
AP1S3Q96PC3 BTF3P9-201ENST00000418784 283 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 RPF2P1-201ENST00000424137 906 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.22□□□□□ -2.05
AP1S3Q96PC3 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC2.22□□□□□ -2.05
AP1S3Q96PC3 SNRPEP4-201ENST00000435815 279 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 AC005019.1-201ENST00000436455 431 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.22□□□□□ -2.05
AP1S3Q96PC3 NUTF2P7-201ENST00000453086 375 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 RAD51AP1P1-201ENST00000484195 1001 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 AC021678.1-201ENST00000505195 936 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 HMGN1P15-201ENST00000513870 295 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.22□□□□□ -2.05
AP1S3Q96PC3 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.22□□□□□ -2.05
AP1S3Q96PC3 AC011611.1-201ENST00000552179 197 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC2.22□□□□□ -2.05
AP1S3Q96PC3 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.22□□□□□ -2.05
AP1S3Q96PC3 AC012182.1-201ENST00000570133 895 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 MIR4700-201ENST00000578311 74 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
AP1S3Q96PC3 AC020895.1-201ENST00000595362 272 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 DUXAP3-201ENST00000603616 594 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.22□□□□□ -2.05
AP1S3Q96PC3 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.22□□□□□ -2.05
AP1S3Q96PC3 AL121772.2-201ENST00000614331 297 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 AC105227.2-201ENST00000615075 605 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 AC009464.1-201ENST00000615731 469 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
AP1S3Q96PC3 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC2.22□□□□□ -2.05
AP1S3Q96PC3 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
AP1S3Q96PC3 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
AP1S3Q96PC3 AC138915.1-201ENST00000565427 1685 ntBASIC2.22□□□□□ -2.05
AP1S3Q96PC3 AL645568.2-201ENST00000432815 1337 ntBASIC2.21□□□□□ -2.06
AP1S3Q96PC3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
AP1S3Q96PC3 RNA5SP393-201ENST00000363423 117 ntBASIC2.21□□□□□ -2.06
AP1S3Q96PC3 RNU6-1027P-201ENST00000383998 107 ntBASIC2.21□□□□□ -2.06
AP1S3Q96PC3 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
AP1S3Q96PC3 METTL5-204ENST00000409340 472 ntTSL 5 BASIC2.21□□□□□ -2.06
AP1S3Q96PC3 AL451074.5-201ENST00000415894 435 ntBASIC2.21□□□□□ -2.06
AP1S3Q96PC3 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.21□□□□□ -2.06
AP1S3Q96PC3 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC2.21□□□□□ -2.06
AP1S3Q96PC3 AC007389.2-201ENST00000434630 306 ntBASIC2.21□□□□□ -2.06
AP1S3Q96PC3 MTCYBP12-201ENST00000440559 1134 ntBASIC2.21□□□□□ -2.06
AP1S3Q96PC3 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
AP1S3Q96PC3 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC2.21□□□□□ -2.06
AP1S3Q96PC3 snoU13.3-201ENST00000459441 104 ntBASIC2.21□□□□□ -2.06
AP1S3Q96PC3 RPS17P11-201ENST00000474297 293 ntBASIC2.21□□□□□ -2.06
AP1S3Q96PC3 RPS29P2-201ENST00000479278 136 ntBASIC2.21□□□□□ -2.06
AP1S3Q96PC3 RPL9P33-201ENST00000484311 566 ntBASIC2.21□□□□□ -2.06
AP1S3Q96PC3 RN7SL20P-201ENST00000488827 297 ntBASIC2.21□□□□□ -2.06
AP1S3Q96PC3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
AP1S3Q96PC3 AC021146.7-201ENST00000509604 775 ntBASIC2.21□□□□□ -2.06
AP1S3Q96PC3 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.21□□□□□ -2.06
AP1S3Q96PC3 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC2.21□□□□□ -2.06
AP1S3Q96PC3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.21□□□□□ -2.06
AP1S3Q96PC3 AC087373.1-201ENST00000524920 491 ntBASIC2.21□□□□□ -2.06
AP1S3Q96PC3 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC2.21□□□□□ -2.06
AP1S3Q96PC3 AL121594.4-201ENST00000556211 1196 ntBASIC2.21□□□□□ -2.06
AP1S3Q96PC3 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC2.21□□□□□ -2.06
AP1S3Q96PC3 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC2.21□□□□□ -2.06
AP1S3Q96PC3 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.21□□□□□ -2.06
AP1S3Q96PC3 MIR4446-201ENST00000578505 67 ntBASIC2.21□□□□□ -2.06
AP1S3Q96PC3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC2.21□□□□□ -2.06
AP1S3Q96PC3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.21□□□□□ -2.06
AP1S3Q96PC3 AC113368.1-201ENST00000603736 382 ntBASIC2.21□□□□□ -2.06
AP1S3Q96PC3 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.21□□□□□ -2.06
AP1S3Q96PC3 AL161637.1-201ENST00000622380 412 ntBASIC2.21□□□□□ -2.06
AP1S3Q96PC3 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC2.21□□□□□ -2.06
AP1S3Q96PC3 AP003122.5-201ENST00000527668 3766 ntBASIC2.21□□□□□ -2.06
AP1S3Q96PC3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
AP1S3Q96PC3 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
AP1S3Q96PC3 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC2.2□□□□□ -2.06
AP1S3Q96PC3 DEFA7P-201ENST00000382676 285 ntBASIC2.2□□□□□ -2.06
AP1S3Q96PC3 MIR592-201ENST00000384959 97 ntBASIC2.2□□□□□ -2.06
AP1S3Q96PC3 MIR181B1-201ENST00000385240 110 ntBASIC2.2□□□□□ -2.06
AP1S3Q96PC3 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.2□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 146.5 ms