Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 MIR3158-1-201ENST00000583596 81 ntBASIC3.07□□□□□ -1.92
CCDC42Q96M95 AC009303.3-201ENST00000591103 736 ntBASIC3.07□□□□□ -1.92
CCDC42Q96M95 ZNF92P3-201ENST00000596594 954 ntBASIC3.07□□□□□ -1.92
CCDC42Q96M95 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.07□□□□□ -1.92
CCDC42Q96M95 AL731566.2-201ENST00000618971 317 ntBASIC3.07□□□□□ -1.92
CCDC42Q96M95 AC022509.4-201ENST00000621404 572 ntBASIC3.07□□□□□ -1.92
CCDC42Q96M95 AL161637.1-201ENST00000622380 412 ntBASIC3.07□□□□□ -1.92
CCDC42Q96M95 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CCDC42Q96M95 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.07□□□□□ -1.92
CCDC42Q96M95 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
CCDC42Q96M95 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CCDC42Q96M95 RNA5SP267-201ENST00000364893 126 ntBASIC3.06□□□□□ -1.92
CCDC42Q96M95 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CCDC42Q96M95 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC42Q96M95 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC42Q96M95 MTND4P31-201ENST00000425607 1343 ntBASIC3.06□□□□□ -1.92
CCDC42Q96M95 PSMA2P3-201ENST00000429685 675 ntBASIC3.06□□□□□ -1.92
CCDC42Q96M95 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC42Q96M95 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC42Q96M95 RPL39P40-201ENST00000445481 146 ntBASIC3.06□□□□□ -1.92
CCDC42Q96M95 RPL37P4-201ENST00000448908 268 ntBASIC3.06□□□□□ -1.92
CCDC42Q96M95 AL513343.1-201ENST00000451818 792 ntBASIC3.06□□□□□ -1.92
CCDC42Q96M95 FAM133DP-201ENST00000464802 691 ntBASIC3.06□□□□□ -1.92
CCDC42Q96M95 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.06□□□□□ -1.92
CCDC42Q96M95 RPS3AP43-201ENST00000479743 781 ntBASIC3.06□□□□□ -1.92
CCDC42Q96M95 AC103975.1-201ENST00000482506 483 ntBASIC3.06□□□□□ -1.92
CCDC42Q96M95 HMGB1P38-201ENST00000490557 577 ntBASIC3.06□□□□□ -1.92
CCDC42Q96M95 RN7SL504P-201ENST00000494496 287 ntBASIC3.06□□□□□ -1.92
CCDC42Q96M95 HSPD1P15-201ENST00000505573 1122 ntBASIC3.06□□□□□ -1.92
CCDC42Q96M95 ARL4AP2-201ENST00000507378 601 ntBASIC3.06□□□□□ -1.92
CCDC42Q96M95 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.06□□□□□ -1.92
CCDC42Q96M95 GMPSP1-201ENST00000514075 579 ntBASIC3.06□□□□□ -1.92
CCDC42Q96M95 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC42Q96M95 AC092593.1-201ENST00000515413 1815 ntBASIC3.06□□□□□ -1.92
CCDC42Q96M95 AC009812.2-201ENST00000517657 457 ntBASIC3.06□□□□□ -1.92
CCDC42Q96M95 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.06□□□□□ -1.92
CCDC42Q96M95 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
CCDC42Q96M95 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.06□□□□□ -1.92
CCDC42Q96M95 AC074029.1-201ENST00000552531 1044 ntBASIC3.06□□□□□ -1.92
CCDC42Q96M95 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC42Q96M95 MIR3605-201ENST00000583214 100 ntBASIC3.06□□□□□ -1.92
CCDC42Q96M95 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC42Q96M95 BNIP3P11-201ENST00000603878 563 ntBASIC3.06□□□□□ -1.92
CCDC42Q96M95 AL359198.2-201ENST00000611836 194 ntBASIC3.06□□□□□ -1.92
CCDC42Q96M95 AC231759.1-201ENST00000616455 597 ntBASIC3.06□□□□□ -1.92
CCDC42Q96M95 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.06□□□□□ -1.92
CCDC42Q96M95 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.06□□□□□ -1.92
CCDC42Q96M95 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC42Q96M95 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC42Q96M95 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
CCDC42Q96M95 RNU6-335P-201ENST00000364563 113 ntBASIC3.05□□□□□ -1.92
CCDC42Q96M95 AL138880.1-201ENST00000405824 642 ntBASIC3.05□□□□□ -1.92
CCDC42Q96M95 RNU2-71P-201ENST00000411395 189 ntBASIC3.05□□□□□ -1.92
CCDC42Q96M95 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC42Q96M95 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC42Q96M95 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.05□□□□□ -1.92
CCDC42Q96M95 AC109583.1-201ENST00000432156 268 ntBASIC3.05□□□□□ -1.92
CCDC42Q96M95 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC42Q96M95 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC42Q96M95 RSL24D1P2-201ENST00000445584 366 ntBASIC3.05□□□□□ -1.92
CCDC42Q96M95 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC42Q96M95 SSXP4-201ENST00000451349 245 ntBASIC3.05□□□□□ -1.92
CCDC42Q96M95 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC42Q96M95 AC006445.1-201ENST00000491925 405 ntBASIC3.05□□□□□ -1.92
CCDC42Q96M95 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC42Q96M95 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.05□□□□□ -1.92
CCDC42Q96M95 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.05□□□□□ -1.92
CCDC42Q96M95 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC42Q96M95 SNORA67.7-201ENST00000516664 135 ntBASIC3.05□□□□□ -1.92
CCDC42Q96M95 PSMA2P1-201ENST00000526365 646 ntBASIC3.05□□□□□ -1.92
CCDC42Q96M95 SETP2-201ENST00000553886 926 ntBASIC3.05□□□□□ -1.92
CCDC42Q96M95 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC42Q96M95 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.05□□□□□ -1.92
CCDC42Q96M95 IGHV3-29-201ENST00000604817 344 ntBASIC3.05□□□□□ -1.92
CCDC42Q96M95 AL109618.2-201ENST00000605527 211 ntBASIC3.05□□□□□ -1.92
CCDC42Q96M95 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.05□□□□□ -1.92
CCDC42Q96M95 AC006133.1-201ENST00000617106 264 ntBASIC3.05□□□□□ -1.92
CCDC42Q96M95 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.05□□□□□ -1.92
CCDC42Q96M95 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.05□□□□□ -1.92
CCDC42Q96M95 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC42Q96M95 AL512633.1-201ENST00000399931 655 ntBASIC3.04□□□□□ -1.92
CCDC42Q96M95 AL158156.1-201ENST00000422509 473 ntBASIC3.04□□□□□ -1.92
CCDC42Q96M95 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC42Q96M95 MTCO3P17-201ENST00000443775 513 ntBASIC3.04□□□□□ -1.92
CCDC42Q96M95 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC42Q96M95 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC42Q96M95 OR6K1P-201ENST00000456766 971 ntBASIC3.04□□□□□ -1.92
CCDC42Q96M95 AC003982.1-202ENST00000469928 248 ntBASIC3.04□□□□□ -1.92
CCDC42Q96M95 RN7SL297P-201ENST00000483161 293 ntBASIC3.04□□□□□ -1.92
CCDC42Q96M95 RPL9P33-201ENST00000484311 566 ntBASIC3.04□□□□□ -1.92
CCDC42Q96M95 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
CCDC42Q96M95 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.04□□□□□ -1.92
CCDC42Q96M95 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC42Q96M95 CCNG2P1-201ENST00000549521 1000 ntBASIC3.04□□□□□ -1.92
CCDC42Q96M95 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC42Q96M95 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.04□□□□□ -1.92
CCDC42Q96M95 AL121594.4-201ENST00000556211 1196 ntBASIC3.04□□□□□ -1.92
CCDC42Q96M95 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.04□□□□□ -1.92
CCDC42Q96M95 AC005046.1-201ENST00000608515 625 ntBASIC3.04□□□□□ -1.92
CCDC42Q96M95 AC135803.1-201ENST00000608748 565 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms