Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 TRIM60P11Y-201ENST00000445313 801 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AL592447.1-201ENST00000447592 540 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 MTCO1P27-201ENST00000448269 226 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 TPT1P12-201ENST00000448968 492 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.43□□□□□ -1.7
VPS50Q96JG6 DNAJC19P1-201ENST00000455312 319 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC026410.2-201ENST00000460281 156 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 RPL7P22-201ENST00000466005 733 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 RN7SL354P-201ENST00000469282 294 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AP000797.1-201ENST00000478870 387 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC012158.1-204ENST00000483430 465 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC108022.1-201ENST00000493466 478 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC146944.2-203ENST00000502493 354 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC108941.1-201ENST00000502853 530 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC114981.1-201ENST00000503897 678 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC111000.3-201ENST00000508057 576 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC139495.1-202ENST00000513164 354 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS50Q96JG6 MTND5P4-201ENST00000514978 288 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 RNU6-720P-201ENST00000516363 108 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC025881.1-201ENST00000518851 512 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AP002748.2-201ENST00000528671 348 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS50Q96JG6 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS50Q96JG6 LSM6P2-201ENST00000552208 177 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.43□□□□□ -1.7
VPS50Q96JG6 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS50Q96JG6 BNIP3P23-201ENST00000599655 511 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC006338.2-201ENST00000616864 791 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 MIR6864-201ENST00000617935 70 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS50Q96JG6 AC068722.2-201ENST00000618734 544 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 AL359715.5-201ENST00000623431 443 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS50Q96JG6 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS50Q96JG6 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS50Q96JG6 AL022578.1-201ENST00000439330 1433 ntBASIC4.43□□□□□ -1.7
VPS50Q96JG6 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.43□□□□□ -1.7
VPS50Q96JG6 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.43□□□□□ -1.7
VPS50Q96JG6 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
VPS50Q96JG6 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
VPS50Q96JG6 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS50Q96JG6 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS50Q96JG6 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS50Q96JG6 RN7SKP44-201ENST00000363602 316 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 RNU1-32P-201ENST00000363937 159 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 RNU4-91P-201ENST00000364778 135 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
VPS50Q96JG6 RNU6-348P-201ENST00000384386 107 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 AC069218.2-201ENST00000411665 344 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 AC140479.3-201ENST00000418944 1126 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 RPS3AP44-201ENST00000425466 790 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 RPS6P12-201ENST00000432491 726 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 MTND5P28-201ENST00000438005 1594 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 GDI2P2-201ENST00000445131 608 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 AC009220.1-201ENST00000451614 275 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 AC104073.1-201ENST00000451988 151 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS50Q96JG6 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 ARL2BPP4-201ENST00000506854 471 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 AC091868.1-201ENST00000508746 304 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 AF131216.2-201ENST00000512316 564 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS50Q96JG6 AC009643.1-201ENST00000532030 391 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 AC074029.1-201ENST00000552531 1044 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 HSPE1P3-201ENST00000559254 309 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 AC007599.1-201ENST00000568688 1174 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 AC083760.1-201ENST00000589621 670 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 AL136363.2-201ENST00000604173 851 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS50Q96JG6 AC015540.1-201ENST00000615828 501 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 AC004825.2-201ENST00000616634 455 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 AC103858.2-201ENST00000621471 543 ntBASIC4.42□□□□□ -1.7
VPS50Q96JG6 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.42□□□□□ -1.7
VPS50Q96JG6 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
VPS50Q96JG6 OR56B2P-202ENST00000641377 2453 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms