Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LRCH3Q96II8 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LRCH3Q96II8 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LRCH3Q96II8 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
LRCH3Q96II8 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.73□□□□□ -1.33
LRCH3Q96II8 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LRCH3Q96II8 SAGE3P-201ENST00000619800 1635 ntBASIC6.72□□□□□ -1.33
LRCH3Q96II8 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.72□□□□□ -1.33
LRCH3Q96II8 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
LRCH3Q96II8 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LRCH3Q96II8 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LRCH3Q96II8 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
LRCH3Q96II8 AL591848.4-201ENST00000567832 3472 ntBASIC6.72□□□□□ -1.33
LRCH3Q96II8 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
LRCH3Q96II8 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LRCH3Q96II8 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LRCH3Q96II8 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
LRCH3Q96II8 CACNB4-225ENST00000636442 4232 ntTSL 5 BASIC6.72□□□□□ -1.33
LRCH3Q96II8 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
LRCH3Q96II8 RNU6-959P-201ENST00000384671 107 ntBASIC6.72□□□□□ -1.33
LRCH3Q96II8 MIR628-201ENST00000385229 95 ntBASIC6.72□□□□□ -1.33
LRCH3Q96II8 RN7SKP51-201ENST00000410781 304 ntBASIC6.72□□□□□ -1.33
LRCH3Q96II8 RPL36P18-201ENST00000419316 318 ntBASIC6.72□□□□□ -1.33
LRCH3Q96II8 UBE2V1P4-201ENST00000425374 344 ntBASIC6.72□□□□□ -1.33
LRCH3Q96II8 AC092162.1-201ENST00000432828 434 ntBASIC6.72□□□□□ -1.33
LRCH3Q96II8 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
LRCH3Q96II8 OR2AO1P-201ENST00000476497 403 ntBASIC6.72□□□□□ -1.33
LRCH3Q96II8 RN7SL326P-201ENST00000477493 296 ntBASIC6.72□□□□□ -1.33
LRCH3Q96II8 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.72□□□□□ -1.33
LRCH3Q96II8 Y_RNA.687-201ENST00000516558 91 ntBASIC6.72□□□□□ -1.33
LRCH3Q96II8 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.72□□□□□ -1.33
LRCH3Q96II8 RPL23AP84-201ENST00000571193 464 ntBASIC6.72□□□□□ -1.33
LRCH3Q96II8 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
LRCH3Q96II8 MIR4776-2-201ENST00000580204 80 ntBASIC6.72□□□□□ -1.33
LRCH3Q96II8 AL078605.1-201ENST00000603529 500 ntBASIC6.72□□□□□ -1.33
LRCH3Q96II8 NANOGP3-201ENST00000605855 286 ntBASIC6.72□□□□□ -1.33
LRCH3Q96II8 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.72□□□□□ -1.33
LRCH3Q96II8 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
LRCH3Q96II8 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC6.72□□□□□ -1.33
LRCH3Q96II8 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.72□□□□□ -1.33
LRCH3Q96II8 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
LRCH3Q96II8 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
LRCH3Q96II8 AC020658.2-201ENST00000559030 4020 ntBASIC6.72□□□□□ -1.33
LRCH3Q96II8 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
LRCH3Q96II8 AC090740.1-201ENST00000623193 2262 ntBASIC6.71□□□□□ -1.33
LRCH3Q96II8 OSBPL9P4-201ENST00000371707 1800 ntBASIC6.71□□□□□ -1.33
LRCH3Q96II8 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.71□□□□□ -1.33
LRCH3Q96II8 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
LRCH3Q96II8 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.33
LRCH3Q96II8 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.33
LRCH3Q96II8 AC110716.2-201ENST00000563865 3945 ntBASIC6.71□□□□□ -1.34
LRCH3Q96II8 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LRCH3Q96II8 AL021877.2-201ENST00000624442 10684 ntBASIC6.71□□□□□ -1.34
LRCH3Q96II8 RNU1-76P-201ENST00000362903 159 ntBASIC6.71□□□□□ -1.34
LRCH3Q96II8 RNA5SP333-201ENST00000363466 118 ntBASIC6.71□□□□□ -1.34
LRCH3Q96II8 RNA5SP334-201ENST00000364825 118 ntBASIC6.71□□□□□ -1.34
LRCH3Q96II8 SNORD20-201ENST00000384550 80 ntBASIC6.71□□□□□ -1.34
LRCH3Q96II8 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC6.71□□□□□ -1.34
LRCH3Q96II8 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.71□□□□□ -1.34
LRCH3Q96II8 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LRCH3Q96II8 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC6.71□□□□□ -1.34
LRCH3Q96II8 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC6.71□□□□□ -1.34
LRCH3Q96II8 NUTF2P3-201ENST00000448540 384 ntBASIC6.71□□□□□ -1.34
LRCH3Q96II8 SNORD97-201ENST00000459187 142 ntBASIC6.71□□□□□ -1.34
LRCH3Q96II8 AC006463.2-201ENST00000473326 348 ntBASIC6.71□□□□□ -1.34
LRCH3Q96II8 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.71□□□□□ -1.34
LRCH3Q96II8 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6.71□□□□□ -1.34
LRCH3Q96II8 RN7SKP96-201ENST00000516948 297 ntBASIC6.71□□□□□ -1.34
LRCH3Q96II8 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.71□□□□□ -1.34
LRCH3Q96II8 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC6.71□□□□□ -1.34
LRCH3Q96II8 SNORA70D-201ENST00000578836 135 ntBASIC6.71□□□□□ -1.34
LRCH3Q96II8 MIR3144-201ENST00000579460 79 ntBASIC6.71□□□□□ -1.34
LRCH3Q96II8 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC6.71□□□□□ -1.34
LRCH3Q96II8 AC115085.1-201ENST00000588924 229 ntBASIC6.71□□□□□ -1.34
LRCH3Q96II8 ELOCP5-201ENST00000604924 333 ntBASIC6.71□□□□□ -1.34
LRCH3Q96II8 uc_338.18-201ENST00000615451 175 ntBASIC6.71□□□□□ -1.34
LRCH3Q96II8 AL161756.3-201ENST00000641216 2071 ntBASIC6.71□□□□□ -1.34
LRCH3Q96II8 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.71□□□□□ -1.34
LRCH3Q96II8 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LRCH3Q96II8 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.71□□□□□ -1.34
LRCH3Q96II8 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LRCH3Q96II8 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
LRCH3Q96II8 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
LRCH3Q96II8 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.71□□□□□ -1.34
LRCH3Q96II8 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.34
LRCH3Q96II8 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.71□□□□□ -1.34
LRCH3Q96II8 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
LRCH3Q96II8 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
LRCH3Q96II8 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
LRCH3Q96II8 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
LRCH3Q96II8 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
LRCH3Q96II8 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LRCH3Q96II8 GABPAP-201ENST00000419271 1356 ntBASIC6.7□□□□□ -1.34
LRCH3Q96II8 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
LRCH3Q96II8 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC6.7□□□□□ -1.34
LRCH3Q96II8 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
LRCH3Q96II8 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
LRCH3Q96II8 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
LRCH3Q96II8 AC006600.2-201ENST00000624834 2506 ntBASIC6.7□□□□□ -1.34
LRCH3Q96II8 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms