Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.25□□□□□ -1.89
ECHDC3Q96DC8 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC3.25□□□□□ -1.89
ECHDC3Q96DC8 MIR5195-201ENST00000583555 115 ntBASIC3.25□□□□□ -1.89
ECHDC3Q96DC8 AC011492.1-201ENST00000600023 315 ntBASIC3.25□□□□□ -1.89
ECHDC3Q96DC8 AL365400.2-201ENST00000605604 902 ntBASIC3.25□□□□□ -1.89
ECHDC3Q96DC8 AC016877.3-201ENST00000606778 504 ntBASIC3.25□□□□□ -1.89
ECHDC3Q96DC8 AC073476.4-201ENST00000628409 72 ntBASIC3.25□□□□□ -1.89
ECHDC3Q96DC8 MIR3651-201ENST00000630427 90 ntBASIC3.25□□□□□ -1.89
ECHDC3Q96DC8 AL356118.1-201ENST00000635272 1078 ntBASIC3.25□□□□□ -1.89
ECHDC3Q96DC8 MIR7153-201ENST00000637758 57 ntBASIC3.25□□□□□ -1.89
ECHDC3Q96DC8 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ECHDC3Q96DC8 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ECHDC3Q96DC8 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ECHDC3Q96DC8 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ECHDC3Q96DC8 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.25□□□□□ -1.89
ECHDC3Q96DC8 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
ECHDC3Q96DC8 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 AC016716.1-201ENST00000265882 708 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 SNORA11C-201ENST00000408532 129 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 MTCYBP24-201ENST00000420387 1106 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 CST9LP2-201ENST00000437612 320 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 UBE2V1P5-201ENST00000440070 405 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 HMGB3P11-201ENST00000440127 604 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 AC004865.1-201ENST00000442276 1003 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 RNFT1P2-201ENST00000443064 757 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 AL500527.1-201ENST00000448532 255 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 RPL23AP15-201ENST00000450202 459 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 AC233982.1-201ENST00000451247 436 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 DNAJC19P8-201ENST00000452887 259 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 AL035407.2-201ENST00000454090 378 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 RPL5P24-201ENST00000463742 885 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 OR52A4P-202ENST00000481634 799 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 RNU6-1073P-201ENST00000517182 106 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 AF279873.1-201ENST00000523393 313 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 AC104229.1-201ENST00000561364 255 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 AC091488.1-201ENST00000604239 660 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 AL009028.1-201ENST00000604895 802 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 AC007496.3-201ENST00000624987 3443 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 PABPC1P7-201ENST00000413177 1513 ntBASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
ECHDC3Q96DC8 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 DSTNP4-201ENST00000399472 474 ntBASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 ATP5F1P6-201ENST00000402768 767 ntBASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 MTND3P20-201ENST00000407663 186 ntBASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 AC093422.3-201ENST00000428506 305 ntBASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 BX679664.1-201ENST00000434429 253 ntBASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 AC006028.1-201ENST00000438379 402 ntBASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 AL359893.1-201ENST00000447628 1580 ntBASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 AC104978.1-201ENST00000449387 391 ntBASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 CYCSP20-201ENST00000473154 315 ntBASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 RN7SL504P-201ENST00000494496 287 ntBASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 AC024341.1-201ENST00000526444 1552 ntBASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 EIF5A2P1-201ENST00000564027 460 ntBASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 MTCYBP28-201ENST00000566728 1132 ntBASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 AC012254.4-201ENST00000588843 273 ntBASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 AC138932.5-201ENST00000617759 563 ntBASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 AC073569.3-201ENST00000619055 682 ntBASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 AL118508.4-201ENST00000624142 1176 ntBASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
ECHDC3Q96DC8 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 SNORA38.1-201ENST00000364172 131 ntBASIC3.22□□□□□ -1.89
ECHDC3Q96DC8 Y_RNA.333-201ENST00000365274 102 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms