Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 RPS4XP18-201ENST00000495480 763 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 TXNP6-201ENST00000510190 310 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 AP000827.1-201ENST00000527814 258 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 DYNLL1P4-201ENST00000549314 266 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 LINC00622-201ENST00000562811 1570 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 MIR3913-1-201ENST00000577744 102 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 AC091178.1-203ENST00000584586 279 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 AL353997.4-201ENST00000586196 166 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 BPIFA4P-203ENST00000603168 689 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 AL161729.4-201ENST00000604650 476 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 AL390208.1-201ENST00000605885 644 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 AC091304.9-201ENST00000612091 226 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 AC005086.4-201ENST00000623065 213 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 AC110994.2-201ENST00000635481 492 ntBASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CTHRC1Q96CG8 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 OR4G2P-201ENST00000328113 903 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 RNVU1-3-201ENST00000364313 161 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 RNY4P34-201ENST00000364779 95 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 Y_RNA.296-201ENST00000364930 108 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 SNORD82-201ENST00000365530 70 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 MIR181A1-201ENST00000385026 110 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 RPL31P1-201ENST00000398116 372 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 MTND1P21-201ENST00000412991 285 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 AL807761.1-201ENST00000417622 171 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 AL035410.1-201ENST00000427409 427 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 AL590233.1-201ENST00000430017 456 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 RPEP2-201ENST00000432149 701 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 NPM1P49-201ENST00000448027 714 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 AL162591.2-201ENST00000449634 317 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 GAPDHP17-201ENST00000449858 1001 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 RPL23AP65-201ENST00000475608 468 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 IGLVIV-53-201ENST00000520107 367 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 AL133241.1-201ENST00000556832 487 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 AC084757.1-201ENST00000559987 490 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 AL157394.1-201ENST00000562983 1224 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 NRBF2P1-201ENST00000587407 859 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 AL606834.2-201ENST00000602954 668 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 AL009028.1-201ENST00000604895 802 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 EOGT-210ENST00000615922 1931 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 KPNA2P2-201ENST00000419546 1489 ntBASIC4.24□□□□□ -1.73
CTHRC1Q96CG8 AL672167.1-203ENST00000641299 2975 ntBASIC4.23□□□□□ -1.73
CTHRC1Q96CG8 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CTHRC1Q96CG8 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.23□□□□□ -1.73
CTHRC1Q96CG8 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CTHRC1Q96CG8 AC092447.10-201ENST00000620607 1652 ntBASIC4.23□□□□□ -1.73
CTHRC1Q96CG8 AC126323.6-202ENST00000568092 3511 ntBASIC4.23□□□□□ -1.73
CTHRC1Q96CG8 AC011155.1-201ENST00000316512 456 ntBASIC4.23□□□□□ -1.73
CTHRC1Q96CG8 RNU6-853P-201ENST00000364306 107 ntBASIC4.23□□□□□ -1.73
CTHRC1Q96CG8 MIR659-201ENST00000384963 97 ntBASIC4.23□□□□□ -1.73
CTHRC1Q96CG8 SNORD96B-201ENST00000386148 79 ntBASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms