Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS33AQ96AX1 AC116353.3-201ENST00000511215 249 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 RNA5SP468-201ENST00000516782 93 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 AC022861.1-201ENST00000522981 663 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.8□□□□□ -1.8
VPS33AQ96AX1 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.8□□□□□ -1.8
VPS33AQ96AX1 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS33AQ96AX1 AL512347.1-201ENST00000566420 503 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.8□□□□□ -1.8
VPS33AQ96AX1 AC069366.1-201ENST00000583159 838 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 AC020910.2-201ENST00000603635 610 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 AL451086.1-201ENST00000605596 223 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 AC131235.4-201ENST00000609288 620 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.8□□□□□ -1.8
VPS33AQ96AX1 AC244205.2-202ENST00000635781 342 ntBASIC3.8□□□□□ -1.8
VPS33AQ96AX1 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VPS33AQ96AX1 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS33AQ96AX1 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VPS33AQ96AX1 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS33AQ96AX1 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
VPS33AQ96AX1 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS33AQ96AX1 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS33AQ96AX1 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS33AQ96AX1 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS33AQ96AX1 RNA5SP509-201ENST00000364577 119 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 SNORD6-201ENST00000365444 73 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS33AQ96AX1 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS33AQ96AX1 RNU6-1074P-201ENST00000383995 104 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 SNORD3H-201ENST00000384486 214 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 MIR192-201ENST00000384915 110 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 U3.22-201ENST00000391120 215 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 DHFRP6-201ENST00000401776 268 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.79□□□□□ -1.8
VPS33AQ96AX1 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS33AQ96AX1 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 ELOCP9-201ENST00000418624 239 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 AC007742.1-201ENST00000425789 329 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 AL035246.1-201ENST00000433554 1255 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 ELOCP26-201ENST00000436067 329 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 MUPP-201ENST00000438111 566 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 HMGB1P37-201ENST00000439613 609 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 AL662791.1-201ENST00000441992 928 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS33AQ96AX1 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS33AQ96AX1 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.79□□□□□ -1.8
VPS33AQ96AX1 AL136097.1-201ENST00000456945 913 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 AC097493.1-201ENST00000463958 372 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 AC110792.1-201ENST00000491826 472 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 AC004069.2-201ENST00000505438 1114 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 AC108475.1-201ENST00000507880 950 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 RNY4P37-201ENST00000516225 96 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 RNU6-1231P-201ENST00000517185 103 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.79□□□□□ -1.8
VPS33AQ96AX1 MTND2P32-201ENST00000521584 1038 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 AC024224.1-201ENST00000538284 609 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 NBEAP1-201ENST00000554452 979 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.79□□□□□ -1.8
VPS33AQ96AX1 PSMB7P1-201ENST00000556349 514 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 VN1R78P-201ENST00000597393 564 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS33AQ96AX1 AC009974.1-201ENST00000608881 455 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 AC027449.1-201ENST00000608890 407 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 VIS1.1-201ENST00000610517 203 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 AC015967.1-201ENST00000619893 476 ntBASIC3.79□□□□□ -1.8
VPS33AQ96AX1 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS33AQ96AX1 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC3.79□□□□□ -1.8
VPS33AQ96AX1 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS33AQ96AX1 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VPS33AQ96AX1 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VPS33AQ96AX1 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS33AQ96AX1 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS33AQ96AX1 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
VPS33AQ96AX1 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS33AQ96AX1 OR5BR1P-201ENST00000524992 1330 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.78□□□□□ -1.8
VPS33AQ96AX1 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
VPS33AQ96AX1 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.78□□□□□ -1.8
VPS33AQ96AX1 RPL23AP57-201ENST00000332361 466 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 RNU6-50P-201ENST00000362356 103 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 SNORA60-201ENST00000362396 134 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 RNA5SP366-201ENST00000365454 123 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 HSPE1P12-201ENST00000412576 301 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 AL137014.1-201ENST00000420490 1226 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS33AQ96AX1 MTCO2P5-201ENST00000422621 426 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS33AQ96AX1 HMGB3P5-201ENST00000428894 612 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC3.78□□□□□ -1.8
VPS33AQ96AX1 AL772161.1-201ENST00000439130 476 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.78□□□□□ -1.8
VPS33AQ96AX1 PTENP1-201ENST00000447117 1215 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 NDUFA12P1-201ENST00000455914 406 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 RPS29P33-201ENST00000456717 146 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 RPL38P1-201ENST00000460914 211 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 RN7SL604P-201ENST00000492589 296 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 AC231760.1-201ENST00000498002 260 ntBASIC3.78□□□□□ -1.8
VPS33AQ96AX1 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms