Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC026422.1-201ENST00000623961 452 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 AC004943.3-201ENST00000624116 600 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 AC026951.1-201ENST00000559530 2459 ntBASIC3.95□□□□□ -1.78
SLC44A1Q8WWI5 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AC066616.2-201ENST00000559334 1481 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 MIR383-201ENST00000362257 73 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 RNU6-1200P-201ENST00000384162 107 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 RNU2-28P-201ENST00000410457 189 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 RPL23AP26-201ENST00000412728 464 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AC009518.2-201ENST00000418056 731 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AC090960.1-201ENST00000421072 306 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 OR5BE1P-201ENST00000425977 939 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AC234781.2-201ENST00000426370 994 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AL390023.1-201ENST00000428836 262 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AL445567.1-201ENST00000439121 144 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 RPL23AP16-201ENST00000441715 421 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 RPS11P1-201ENST00000451072 473 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 SNORA31.9-201ENST00000516429 84 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AC087369.1-201ENST00000520775 996 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 PTP4A1P6-201ENST00000531034 478 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AC091516.1-201ENST00000549191 703 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AC135628.1-201ENST00000568867 534 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 IPO5P1-202ENST00000600039 287 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 Z99497.2-201ENST00000603634 310 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 BRDTP1-201ENST00000605735 677 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AC006270.3-201ENST00000605967 1036 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AC072039.2-201ENST00000608883 439 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AC004223.4-201ENST00000612426 332 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AC068722.2-201ENST00000618734 544 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 MIR3653-201ENST00000625572 110 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 OR5BE1P-202ENST00000641168 1176 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AL139811.1-201ENST00000424779 2299 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 AL122126.1-201ENST00000546905 1318 ntBASIC3.94□□□□□ -1.78
SLC44A1Q8WWI5 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 SNRPEP3-201ENST00000338402 276 ntBASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 RNU6-1243P-201ENST00000364028 107 ntBASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 RNU1-85P-201ENST00000364127 164 ntBASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 SNORA4.1-201ENST00000364263 144 ntBASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 RNU6-1122P-201ENST00000384449 107 ntBASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 RN7SKP177-201ENST00000410567 355 ntBASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 RN7SKP33-201ENST00000410942 340 ntBASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 AC004975.1-201ENST00000428733 208 ntBASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 BMS1P19-201ENST00000433925 393 ntBASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 RANP8-201ENST00000444720 713 ntBASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 RPL26P28-201ENST00000451325 435 ntBASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 TRGVB-201ENST00000453257 471 ntBASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 USP9YP10-201ENST00000454868 628 ntBASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 AL672167.3-201ENST00000465951 960 ntBASIC3.93□□□□□ -1.78
SLC44A1Q8WWI5 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms