Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NEDD1Q8NHV4 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.21□□□□□ -1.42
NEDD1Q8NHV4 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
NEDD1Q8NHV4 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NEDD1Q8NHV4 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NEDD1Q8NHV4 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
NEDD1Q8NHV4 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NEDD1Q8NHV4 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.21□□□□□ -1.42
NEDD1Q8NHV4 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
NEDD1Q8NHV4 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 PANDAR-201ENST00000629595 1506 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 SNRPEP3-201ENST00000338402 276 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 RNU6-1097P-201ENST00000363586 107 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 RNU6-289P-201ENST00000364093 107 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 SNORA58B-201ENST00000364259 136 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 RNU6-38P-201ENST00000384085 107 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 AL121972.1-201ENST00000402023 252 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 RNU6-954P-201ENST00000411355 107 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 EI24P4-201ENST00000423683 1078 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 SKA2P1-201ENST00000425592 390 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 RPL7L1P10-201ENST00000427790 463 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 AL132765.1-201ENST00000434165 553 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 RPL7P29-201ENST00000437151 728 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 PRPS1P1-201ENST00000445305 876 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 GSTA11P-201ENST00000452866 669 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 AC002553.2-201ENST00000453217 340 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 RNU6-333P-201ENST00000459117 107 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 RNU6-1132P-201ENST00000459214 107 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 RN7SL197P-201ENST00000466981 299 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 AC009127.1-201ENST00000467090 155 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 CR383656.1-201ENST00000484916 377 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 AC025465.3-201ENST00000510570 311 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 HMGN2P6-201ENST00000551091 273 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 MIR3118-1-201ENST00000581787 76 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 AC006116.3-201ENST00000592968 361 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 AC010201.1-201ENST00000605051 540 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 RPSAP73-201ENST00000614820 330 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 AC098657.3-201ENST00000620434 263 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 AC083837.1-201ENST00000565297 2994 ntBASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.2□□□□□ -1.42
NEDD1Q8NHV4 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 AC016745.2-201ENST00000608834 3443 ntBASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 RPL23AP57-201ENST00000332361 466 ntBASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 RNU6-1013P-201ENST00000384180 107 ntBASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 AL139397.2-201ENST00000404529 772 ntBASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 RNU2-36P-201ENST00000410361 191 ntBASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 AC092634.6-201ENST00000418558 192 ntBASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 AL137014.1-201ENST00000420490 1226 ntBASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 AC007283.2-201ENST00000424739 197 ntBASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 GPR143P-201ENST00000434155 205 ntBASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 GAPDHP58-201ENST00000438477 1006 ntBASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 RPSAP50-201ENST00000481955 852 ntBASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 RN7SL808P-201ENST00000496066 299 ntBASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 RPSAP51-201ENST00000497462 645 ntBASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 SUMO2P4-201ENST00000504193 276 ntBASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 AC004062.1-201ENST00000509926 645 ntBASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 HMGN1P9-201ENST00000515212 298 ntBASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 AC027309.2-201ENST00000520566 192 ntBASIC6.19□□□□□ -1.42
NEDD1Q8NHV4 OR4R1P-201ENST00000529879 463 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms