Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 SNORD116-9-201ENST00000384000 95 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 SNORD116-3-201ENST00000384287 95 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 SNORD116-7-201ENST00000384404 95 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 SNORD116-5-201ENST00000384462 95 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 RNU11-4P-201ENST00000391149 133 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 PPIAP31-201ENST00000405422 495 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AC083875.1-201ENST00000419509 405 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 PSMA2P3-201ENST00000429685 675 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AL117339.2-201ENST00000430475 180 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 UBE2FP3-201ENST00000436366 524 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AC118469.1-201ENST00000442943 488 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 MTND2P4-201ENST00000445034 1004 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 ARPC3P5-201ENST00000448802 534 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AL162151.2-201ENST00000448875 158 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AL121877.1-201ENST00000453704 622 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AC090453.1-201ENST00000495560 436 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 TMEM251P1-201ENST00000503717 318 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AC093767.1-201ENST00000504523 156 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 RNU6-150P-201ENST00000516237 95 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 IGLVIV-53-201ENST00000520107 367 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AC136618.2-201ENST00000575091 400 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AC022655.2-201ENST00000577280 318 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 MIR4458-201ENST00000578872 75 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 MAGOH2P-202ENST00000584384 429 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AL590229.1-201ENST00000603497 542 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 RPL23AP92-201ENST00000603609 255 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AP003117.2-201ENST00000606010 545 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AC009318.4-201ENST00000620496 486 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AC008443.7-201ENST00000622195 246 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 AC073530.2-201ENST00000623987 261 ntBASIC3.87□□□□□ -1.79
BEST3Q8N1M1 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
BEST3Q8N1M1 NOL8P1-201ENST00000508336 3529 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 MTCO1P23-201ENST00000415223 1526 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 IQCB2P-201ENST00000401788 1633 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AC105074.1-201ENST00000623380 3095 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 RNU1-15P-201ENST00000353977 144 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 RNA5SP388-201ENST00000362584 119 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 RNU1-64P-201ENST00000365443 163 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 MIR708-201ENST00000390708 88 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AL121972.1-201ENST00000402023 252 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AL021407.1-201ENST00000404531 386 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 RPL21P65-201ENST00000406094 466 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AL161631.1-201ENST00000417933 486 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 Z99497.1-201ENST00000421282 135 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 OR51AB1P-201ENST00000429046 620 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 ELOCP18-201ENST00000434209 337 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AC122718.1-201ENST00000439448 744 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 OR6C5P-201ENST00000452388 923 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 USP9YP34-201ENST00000453983 808 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 ARPC3P2-201ENST00000457786 533 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 FAM133DP-201ENST00000464802 691 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 PABPC1P3-201ENST00000469174 459 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 FAM172BP-201ENST00000487497 1089 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 RN7SL604P-201ENST00000492589 296 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AC104164.2-201ENST00000496953 495 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 DSTNP2-201ENST00000504533 515 ntBASIC3.86□□□□□ -1.79
BEST3Q8N1M1 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.86□□□□□ -1.79
BEST3Q8N1M1 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms