Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 AL391987.6-201ENST00000305671 199 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 Y_RNA.84-201ENST00000363011 104 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 Y_RNA.122-201ENST00000363331 96 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 Y_RNA.183-201ENST00000363882 113 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 MIR517A-201ENST00000385001 87 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 AL603910.2-201ENST00000407268 136 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 RN7SKP229-201ENST00000410465 302 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 RPL23AP38-201ENST00000423801 469 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 AL354707.3-201ENST00000427308 331 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 EIF1P2-201ENST00000428233 350 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 AC110602.1-201ENST00000437414 318 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 OR3D1P-201ENST00000438288 955 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 AL353662.1-201ENST00000439099 327 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 AC104073.1-201ENST00000451988 151 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 AC087385.1-201ENST00000475062 312 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 SNORA25.14-201ENST00000516481 132 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 MIR4293-201ENST00000584305 78 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 AC008555.7-201ENST00000605008 583 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 NANOGP3-201ENST00000605855 286 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 BX284668.6-201ENST00000606899 438 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 SDR42E1P1-201ENST00000611327 477 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 AC109309.2-201ENST00000612597 332 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 AC243654.2-201ENST00000612843 443 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 AL590099.1-201ENST00000615276 138 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 MIR6886-201ENST00000619864 61 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 AC116667.2-201ENST00000641075 823 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 AC024587.1-201ENST00000505925 2157 ntBASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
SCUBE3Q8IX30 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 YPEL5-201ENST00000261353 2182 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 RNA5SP110-201ENST00000362638 115 ntBASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 Y_RNA.81-201ENST00000362997 102 ntBASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 Y_RNA.237-201ENST00000364439 102 ntBASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 AP003170.5-201ENST00000397185 335 ntBASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 GCNT1P4-201ENST00000404096 329 ntBASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 AC096920.1-201ENST00000423991 241 ntBASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 AL360081.1-201ENST00000428299 555 ntBASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 AL391987.1-201ENST00000441025 200 ntBASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 RPS3AP46-201ENST00000448352 682 ntBASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 RPS29P26-201ENST00000477483 171 ntBASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 AC069499.1-201ENST00000489433 509 ntBASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 AP002453.1-201ENST00000492327 668 ntBASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 AC109329.1-201ENST00000518744 317 ntBASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 AC144568.1-201ENST00000520139 137 ntBASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 MRPS21P8-201ENST00000569196 235 ntBASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 AC073410.2-201ENST00000603240 332 ntBASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 AP001823.1-201ENST00000604056 1003 ntBASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 MZT1P2-201ENST00000604387 248 ntBASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
SCUBE3Q8IX30 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms