Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 MTND6P33-201ENST00000571794 183 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 ISCA1P3-201ENST00000577104 373 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 VN1R92P-201ENST00000598511 928 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AL139344.1-201ENST00000605228 195 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AC007390.2-201ENST00000606229 3803 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 OR6R2P-201ENST00000609216 300 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AC004908.3-201ENST00000610248 625 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AC015813.4-201ENST00000610469 179 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AC019226.2-201ENST00000625973 424 ntBASIC4.47□□□□□ -1.69
HERC6Q8IVU3 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
HERC6Q8IVU3 AL356473.1-201ENST00000406203 1408 ntBASIC4.46□□□□□ -1.69
HERC6Q8IVU3 MTCO1P23-201ENST00000415223 1526 ntBASIC4.46□□□□□ -1.69
HERC6Q8IVU3 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
HERC6Q8IVU3 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC4.46□□□□□ -1.69
HERC6Q8IVU3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 RNU6-374P-201ENST00000364146 108 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 RNU6-1279P-201ENST00000383917 103 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 RPL23AP29-201ENST00000397284 453 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 AL590084.2-201ENST00000401481 382 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 MTND4LP20-201ENST00000402379 270 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 HMGB1P17-201ENST00000403495 628 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 OR6K5P-201ENST00000447050 945 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 ARPC3P5-201ENST00000448802 534 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 TRGVB-201ENST00000453257 471 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 OR9M1P-201ENST00000459641 921 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 RPS26P28-201ENST00000470806 348 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 AC090013.1-201ENST00000485147 480 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 AC104164.2-201ENST00000496953 495 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 AC108145.1-201ENST00000503770 153 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 AC110768.1-201ENST00000509222 400 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 HMGB3P13-201ENST00000511263 607 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 DUXAP2-201ENST00000519198 589 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 IGLV3-26-201ENST00000520756 302 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 AP003385.6-201ENST00000531603 374 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 AL133457.1-201ENST00000564251 987 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 AL121834.1-201ENST00000572284 509 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 AC106791.2-201ENST00000604680 391 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 RNU6-88P-201ENST00000606801 100 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 AL391261.4-201ENST00000616012 481 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 AL607023.1-201ENST00000620045 248 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 AC078883.4-201ENST00000623218 367 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 AC079228.1-201ENST00000624774 1049 ntBASIC4.46□□□□□ -1.7
HERC6Q8IVU3 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.46□□□□□ -1.7
HERC6Q8IVU3 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AL359893.1-201ENST00000447628 1580 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AC024560.2-201ENST00000507981 1497 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 RNA5SP22-201ENST00000365393 109 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 HSPD1P16-201ENST00000402302 394 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 EIF4EBP2P3-201ENST00000403144 334 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 SNORA11.2-201ENST00000408318 127 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 RN7SKP156-201ENST00000410308 342 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 UBTFL3-201ENST00000418934 1024 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AL953862.1-201ENST00000423016 168 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 OR5BE1P-201ENST00000425977 939 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 RWDD4P2-201ENST00000426392 563 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AC069285.2-201ENST00000440210 275 ntBASIC4.45□□□□□ -1.7
HERC6Q8IVU3 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms