Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 RRN3P3-201ENST00000549207 578 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AC010547.6-201ENST00000571789 193 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AC138761.3-201ENST00000579993 334 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 SNORD39.3-201ENST00000584451 71 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AL354984.3-201ENST00000604803 325 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AC109309.2-201ENST00000612597 332 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AC025574.2-201ENST00000615621 514 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 MIR6133-201ENST00000617057 108 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AL049767.1-202ENST00000637826 242 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AC004656.1-201ENST00000568479 4951 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 AL158163.1-201ENST00000603915 1649 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 SRRM1P3-201ENST00000426911 2678 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
ATG4DQ86TL0 OR13C1P-202ENST00000641378 2919 ntBASIC5.07□□□□□ -1.6
ATG4DQ86TL0 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 AL512646.1-201ENST00000269395 1077 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 RNU6-874P-201ENST00000362390 105 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 RN7SKP145-201ENST00000363291 303 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 SNORA62.1-201ENST00000364287 154 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 MIR454-201ENST00000390180 115 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 RPS4XP9-201ENST00000405151 780 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 AC012065.2-201ENST00000421295 375 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 AC007161.1-204ENST00000423039 460 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 AC113412.1-201ENST00000425840 504 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 OR2AS1P-201ENST00000427827 319 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 RPL23AP50-201ENST00000434149 455 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 MTND5P15-201ENST00000434246 349 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 MED28P3-201ENST00000444288 531 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 RPS15AP1-201ENST00000457423 391 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 RNU7-180P-201ENST00000459240 63 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 AL049714.1-201ENST00000466686 347 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 RPS26P39-201ENST00000469206 341 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 RPL23AP71-201ENST00000470966 469 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 AC104563.1-201ENST00000476147 376 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 RNU6-256P-201ENST00000516747 97 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 AP000907.2-201ENST00000530827 353 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 IGBP1P1-201ENST00000554337 1009 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 MIR4489-201ENST00000578869 62 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 MIR3146-201ENST00000580367 79 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 AC104662.1-201ENST00000604448 511 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 Z82243.1-201ENST00000609432 473 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 AC141273.2-201ENST00000618989 130 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 KPNA2P1-201ENST00000458289 1591 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 XPOTP1-201ENST00000443317 2398 ntBASIC5.06□□□□□ -1.6
ATG4DQ86TL0 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
ATG4DQ86TL0 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 AC140134.1-201ENST00000511830 3544 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 AC005592.1-201ENST00000566527 1640 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
ATG4DQ86TL0 AC092681.1-201ENST00000297369 291 ntBASIC5.05□□□□□ -1.6
ATG4DQ86TL0 Y_RNA.22-201ENST00000362492 102 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms