Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 MTND5P33-201ENST00000571250 1450 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
RNF220Q5VTB9 AC011460.1-201ENST00000636268 1834 ntBASIC4.49□□□□□ -1.69
RNF220Q5VTB9 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 SNORA51.8-201ENST00000384234 132 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 RNU1-106P-201ENST00000384382 164 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 CYB5AP4-201ENST00000396692 399 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 RPL7P25-201ENST00000404151 721 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 RNU6-712P-201ENST00000410558 100 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 RNU2-16P-201ENST00000410712 136 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 AC244098.2-201ENST00000422068 99 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 BX890604.2-201ENST00000427883 474 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 AC016712.1-201ENST00000431088 378 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 PPIAP20-201ENST00000449839 135 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 RPL23AP65-201ENST00000475608 468 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 RN7SL319P-201ENST00000480656 221 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 RN7SL727P-201ENST00000482164 296 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 AC012158.1-204ENST00000483430 465 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 AC004980.4-201ENST00000513375 203 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 RNU6-709P-201ENST00000517257 104 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 OR5M7P-201ENST00000526140 972 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 AC060771.1-201ENST00000582031 164 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 AC090425.2-201ENST00000608818 501 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 OR6R2P-201ENST00000609216 300 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 AL121612.2-201ENST00000612261 482 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 AC008250.2-201ENST00000615261 205 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 AL359715.5-201ENST00000623431 443 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 AC009902.3-201ENST00000606235 2172 ntBASIC4.48□□□□□ -1.69
RNF220Q5VTB9 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
RNF220Q5VTB9 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AL391684.1-202ENST00000641293 1636 ntBASIC4.47□□□□□ -1.69
RNF220Q5VTB9 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 U8.4-201ENST00000363626 134 ntBASIC4.47□□□□□ -1.69
RNF220Q5VTB9 Y_RNA.548-201ENST00000384656 105 ntBASIC4.47□□□□□ -1.69
RNF220Q5VTB9 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AL355433.1-201ENST00000422804 300 ntBASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 HLA-N-201ENST00000437516 135 ntBASIC4.47□□□□□ -1.69
RNF220Q5VTB9 RPL7P11-201ENST00000437586 658 ntBASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AC114495.1-201ENST00000441274 436 ntBASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AC109462.1-201ENST00000491087 368 ntBASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AL139099.1-201ENST00000497398 403 ntBASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AC139783.2-201ENST00000504847 1145 ntBASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AC109464.2-201ENST00000510242 943 ntBASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 BRD9P1-201ENST00000529855 560 ntBASIC4.47□□□□□ -1.69
RNF220Q5VTB9 HAUS8P1-201ENST00000549005 542 ntBASIC4.47□□□□□ -1.69
RNF220Q5VTB9 RPL21P5-201ENST00000554662 472 ntBASIC4.47□□□□□ -1.69
RNF220Q5VTB9 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AC009977.1-201ENST00000586015 570 ntBASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AC012669.1-201ENST00000603209 283 ntBASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AC015871.2-201ENST00000603605 948 ntBASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AC011468.4-201ENST00000603942 409 ntBASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AC131902.3-201ENST00000611767 581 ntBASIC4.47□□□□□ -1.69
RNF220Q5VTB9 AP001506.1-201ENST00000615444 211 ntBASIC4.47□□□□□ -1.69
RNF220Q5VTB9 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.47□□□□□ -1.69
RNF220Q5VTB9 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 193.5 ms