Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC58Q4VC31 RPL37P25-201ENST00000507308 276 ntBASIC2.62□□□□□ -1.99
CCDC58Q4VC31 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC58Q4VC31 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.62□□□□□ -1.99
CCDC58Q4VC31 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.62□□□□□ -1.99
CCDC58Q4VC31 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC58Q4VC31 SCARNA13-201ENST00000516672 275 ntBASIC2.62□□□□□ -1.99
CCDC58Q4VC31 RPPH1-2P-201ENST00000516688 293 ntBASIC2.62□□□□□ -1.99
CCDC58Q4VC31 OR8I1P-201ENST00000529291 931 ntBASIC2.62□□□□□ -1.99
CCDC58Q4VC31 AP000857.1-201ENST00000532151 543 ntBASIC2.62□□□□□ -1.99
CCDC58Q4VC31 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC58Q4VC31 NBEAP1-201ENST00000554452 979 ntBASIC2.62□□□□□ -1.99
CCDC58Q4VC31 NCAPGP2-201ENST00000557911 754 ntBASIC2.62□□□□□ -1.99
CCDC58Q4VC31 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC2.62□□□□□ -1.99
CCDC58Q4VC31 MIR3922-201ENST00000585192 84 ntBASIC2.62□□□□□ -1.99
CCDC58Q4VC31 AL031985.2-201ENST00000600955 480 ntBASIC2.62□□□□□ -1.99
CCDC58Q4VC31 AL392112.1-201ENST00000605115 829 ntBASIC2.62□□□□□ -1.99
CCDC58Q4VC31 CR392039.5-201ENST00000623201 510 ntBASIC2.62□□□□□ -1.99
CCDC58Q4VC31 AC015726.3-201ENST00000624501 418 ntBASIC2.62□□□□□ -1.99
CCDC58Q4VC31 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CCDC58Q4VC31 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.62□□□□□ -1.99
CCDC58Q4VC31 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.62□□□□□ -1.99
CCDC58Q4VC31 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC2.61□□□□□ -1.99
CCDC58Q4VC31 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
CCDC58Q4VC31 RPL9P7-201ENST00000330965 580 ntBASIC2.61□□□□□ -1.99
CCDC58Q4VC31 RNU1-35P-201ENST00000362782 153 ntBASIC2.61□□□□□ -1.99
CCDC58Q4VC31 RNA5SP391-201ENST00000363456 119 ntBASIC2.61□□□□□ -1.99
CCDC58Q4VC31 U3.42-201ENST00000408746 214 ntBASIC2.61□□□□□ -1.99
CCDC58Q4VC31 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC58Q4VC31 SUMO1P4-201ENST00000429430 302 ntBASIC2.61□□□□□ -1.99
CCDC58Q4VC31 AC073901.1-201ENST00000462471 408 ntBASIC2.61□□□□□ -1.99
CCDC58Q4VC31 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC58Q4VC31 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC58Q4VC31 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC58Q4VC31 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.61□□□□□ -1.99
CCDC58Q4VC31 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC58Q4VC31 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC58Q4VC31 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC58Q4VC31 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.61□□□□□ -1.99
CCDC58Q4VC31 AC020895.1-201ENST00000595362 272 ntBASIC2.61□□□□□ -1.99
CCDC58Q4VC31 AC008083.4-201ENST00000615076 444 ntBASIC2.61□□□□□ -1.99
CCDC58Q4VC31 AC139713.2-210ENST00000641741 992 ntBASIC2.61□□□□□ -1.99
CCDC58Q4VC31 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CCDC58Q4VC31 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.61□□□□□ -1.99
CCDC58Q4VC31 AC093010.3-201ENST00000570269 15214 ntBASIC2.61□□□□□ -1.99
CCDC58Q4VC31 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.61□□□□□ -1.99
CCDC58Q4VC31 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC58Q4VC31 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC58Q4VC31 MIR22-201ENST00000362190 85 ntBASIC2.6□□□□□ -1.99
CCDC58Q4VC31 RNU2-25P-201ENST00000411041 191 ntBASIC2.6□□□□□ -1.99
CCDC58Q4VC31 AC245052.5-201ENST00000416320 649 ntBASIC2.6□□□□□ -1.99
CCDC58Q4VC31 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC58Q4VC31 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC58Q4VC31 AL445528.1-201ENST00000426330 420 ntBASIC2.6□□□□□ -1.99
CCDC58Q4VC31 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC58Q4VC31 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC58Q4VC31 ELOCP13-201ENST00000443934 329 ntBASIC2.6□□□□□ -1.99
CCDC58Q4VC31 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC58Q4VC31 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC2.6□□□□□ -1.99
CCDC58Q4VC31 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
CCDC58Q4VC31 AC103987.1-201ENST00000473394 348 ntBASIC2.6□□□□□ -1.99
CCDC58Q4VC31 OR2A20P-203ENST00000498397 1268 ntBASIC2.6□□□□□ -1.99
CCDC58Q4VC31 AC010625.1-201ENST00000511296 403 ntBASIC2.6□□□□□ -1.99
CCDC58Q4VC31 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.6□□□□□ -1.99
CCDC58Q4VC31 FAM60DP-201ENST00000524174 632 ntBASIC2.6□□□□□ -1.99
CCDC58Q4VC31 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.6□□□□□ -1.99
CCDC58Q4VC31 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.6□□□□□ -1.99
CCDC58Q4VC31 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
CCDC58Q4VC31 UBL5P2-201ENST00000583788 219 ntBASIC2.6□□□□□ -1.99
CCDC58Q4VC31 MIR6748-201ENST00000610433 71 ntBASIC2.6□□□□□ -1.99
CCDC58Q4VC31 AC012442.3-202ENST00000636742 206 ntBASIC2.6□□□□□ -1.99
CCDC58Q4VC31 OR5BR1P-201ENST00000524992 1330 ntBASIC2.6□□□□□ -1.99
CCDC58Q4VC31 AC091564.4-201ENST00000533934 2194 ntBASIC2.6□□□□□ -1.99
CCDC58Q4VC31 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC58Q4VC31 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC58Q4VC31 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC58Q4VC31 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC58Q4VC31 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC58Q4VC31 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
CCDC58Q4VC31 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
CCDC58Q4VC31 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.59□□□□□ -1.99
CCDC58Q4VC31 RNU6-666P-201ENST00000363499 107 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 MIR490-201ENST00000384865 128 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 AL353692.2-201ENST00000407054 335 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 YPEL5P1-201ENST00000419731 367 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC58Q4VC31 HMGN2P30-201ENST00000423237 256 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC58Q4VC31 HMGN2P31-201ENST00000432430 273 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 AC011242.1-201ENST00000433596 1158 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.59□□□□□ -1.99
CCDC58Q4VC31 PDSS1P2-201ENST00000449397 678 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 HMGB1P15-201ENST00000453854 435 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 AL109741.2-201ENST00000455561 343 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 RPS23P3-201ENST00000470993 430 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC2.59□□□□□ -1.99
CCDC58Q4VC31 AC006499.5-201ENST00000505037 514 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC2.59□□□□□ -1.99
CCDC58Q4VC31 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.59□□□□□ -1.99
CCDC58Q4VC31 SNORA9.3-201ENST00000516383 129 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms