Protein–RNA interactions for Protein: Q16656

NRF1, Nuclear respiratory factor 1, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRF1Q16656 AC073476.4-201ENST00000628409 72 ntBASIC3.19□□□□□ -1.9
NRF1Q16656 AL590396.4-201ENST00000636779 956 ntBASIC3.19□□□□□ -1.9
NRF1Q16656 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.19□□□□□ -1.9
NRF1Q16656 AC138649.5-201ENST00000637456 137 ntBASIC3.19□□□□□ -1.9
NRF1Q16656 AC106858.1-201ENST00000637497 429 ntBASIC3.19□□□□□ -1.9
NRF1Q16656 MTND5P1-201ENST00000445440 1375 ntBASIC3.19□□□□□ -1.9
NRF1Q16656 AC025263.3-201ENST00000622965 1396 ntBASIC3.19□□□□□ -1.9
NRF1Q16656 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NRF1Q16656 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
NRF1Q16656 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
NRF1Q16656 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NRF1Q16656 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NRF1Q16656 RNU5B-1-201ENST00000363286 116 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NRF1Q16656 RPL21P3-201ENST00000395517 478 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 RPL17P50-201ENST00000396131 546 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 RSL24D1P1-201ENST00000404972 493 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 AL355615.1-201ENST00000406187 641 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.18□□□□□ -1.9
NRF1Q16656 RNU6-272P-201ENST00000411028 104 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 AL024507.1-201ENST00000412741 274 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 Z99755.1-201ENST00000414048 380 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 RPL21P110-201ENST00000433345 446 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.18□□□□□ -1.9
NRF1Q16656 AC009969.1-201ENST00000438726 172 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 RPL23AP33-201ENST00000442301 452 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 PRDX3P3-201ENST00000447765 522 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 AC104978.1-201ENST00000449387 391 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 CYCSP35-201ENST00000451978 304 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.18□□□□□ -1.9
NRF1Q16656 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.18□□□□□ -1.9
NRF1Q16656 AC146507.2-201ENST00000460608 476 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.18□□□□□ -1.9
NRF1Q16656 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.18□□□□□ -1.9
NRF1Q16656 RN7SL283P-201ENST00000489055 303 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 AC093278.1-201ENST00000494700 600 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.18□□□□□ -1.9
NRF1Q16656 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.18□□□□□ -1.9
NRF1Q16656 UBE2NP1-201ENST00000545592 458 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.18□□□□□ -1.9
NRF1Q16656 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.18□□□□□ -1.9
NRF1Q16656 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NRF1Q16656 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.18□□□□□ -1.9
NRF1Q16656 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
NRF1Q16656 AC104072.1-201ENST00000568817 668 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 AC006116.10-201ENST00000591836 581 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.18□□□□□ -1.9
NRF1Q16656 AL020997.3-201ENST00000602843 359 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 AL365400.2-201ENST00000605604 902 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.18□□□□□ -1.9
NRF1Q16656 AC096577.2-201ENST00000611455 153 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.18□□□□□ -1.9
NRF1Q16656 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.18□□□□□ -1.9
NRF1Q16656 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NRF1Q16656 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.18□□□□□ -1.9
NRF1Q16656 AC090337.1-201ENST00000579651 2074 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 AC073346.2-201ENST00000624724 2058 ntBASIC3.18□□□□□ -1.9
NRF1Q16656 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.18□□□□□ -1.9
NRF1Q16656 AL356274.2-201ENST00000624379 3752 ntBASIC3.17□□□□□ -1.9
NRF1Q16656 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NRF1Q16656 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.17□□□□□ -1.9
NRF1Q16656 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
NRF1Q16656 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
NRF1Q16656 RNU5B-4P-201ENST00000363508 111 ntBASIC3.17□□□□□ -1.9
NRF1Q16656 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NRF1Q16656 MIR183-201ENST00000384958 110 ntBASIC3.17□□□□□ -1.9
NRF1Q16656 RNU6-1176P-201ENST00000390955 107 ntBASIC3.17□□□□□ -1.9
NRF1Q16656 BTBD10P2-201ENST00000404779 676 ntBASIC3.17□□□□□ -1.9
NRF1Q16656 AC092638.1-201ENST00000411966 1275 ntBASIC3.17□□□□□ -1.9
NRF1Q16656 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.17□□□□□ -1.9
NRF1Q16656 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.17□□□□□ -1.9
NRF1Q16656 AC008280.1-201ENST00000418851 412 ntBASIC3.17□□□□□ -1.9
NRF1Q16656 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.17□□□□□ -1.9
NRF1Q16656 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.17□□□□□ -1.9
NRF1Q16656 AL513175.1-201ENST00000431492 780 ntBASIC3.17□□□□□ -1.9
NRF1Q16656 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.17□□□□□ -1.9
NRF1Q16656 AC092641.1-201ENST00000440229 772 ntBASIC3.17□□□□□ -1.9
NRF1Q16656 Z77249.1-201ENST00000444622 1175 ntBASIC3.17□□□□□ -1.9
NRF1Q16656 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NRF1Q16656 RPL29P29-201ENST00000448725 423 ntBASIC3.17□□□□□ -1.9
NRF1Q16656 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.17□□□□□ -1.9
NRF1Q16656 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.17□□□□□ -1.9
NRF1Q16656 AC073387.1-201ENST00000453261 709 ntBASIC3.17□□□□□ -1.9
NRF1Q16656 U3.44-201ENST00000458938 192 ntBASIC3.17□□□□□ -1.9
NRF1Q16656 RPL23AP62-201ENST00000463396 453 ntBASIC3.17□□□□□ -1.9
NRF1Q16656 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.17□□□□□ -1.9
NRF1Q16656 RN7SL293P-201ENST00000481765 281 ntBASIC3.17□□□□□ -1.9
NRF1Q16656 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.17□□□□□ -1.9
NRF1Q16656 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NRF1Q16656 TMEM248P1-201ENST00000510579 951 ntBASIC3.17□□□□□ -1.9
NRF1Q16656 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.17□□□□□ -1.9
NRF1Q16656 RNU4-60P-201ENST00000517239 135 ntBASIC3.17□□□□□ -1.9
NRF1Q16656 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.17□□□□□ -1.9
NRF1Q16656 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.17□□□□□ -1.9
NRF1Q16656 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.17□□□□□ -1.9
NRF1Q16656 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.17□□□□□ -1.9
NRF1Q16656 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC3.17□□□□□ -1.9
NRF1Q16656 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.17□□□□□ -1.9
NRF1Q16656 AC006518.2-201ENST00000542513 940 ntBASIC3.17□□□□□ -1.9
NRF1Q16656 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms