Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 MTND5P19-201ENST00000424872 1794 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 AC114774.1-201ENST00000507410 1770 ntBASIC5.5□□□□□ -1.53
PCDH1Q08174 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
PCDH1Q08174 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDH1Q08174 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDH1Q08174 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDH1Q08174 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDH1Q08174 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDH1Q08174 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDH1Q08174 OR9K1P-202ENST00000641111 3217 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 AC004076.2-201ENST00000620532 3323 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
PCDH1Q08174 RN7SKP269-201ENST00000365545 319 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 AL136372.1-201ENST00000403060 228 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDH1Q08174 AC069213.2-201ENST00000420238 366 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDH1Q08174 AL590609.2-201ENST00000421430 368 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 AC126120.1-201ENST00000431082 470 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 EZH2P1-201ENST00000431167 291 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 AC005019.1-201ENST00000436455 431 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 AC092013.1-201ENST00000438795 332 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 AL353691.1-201ENST00000451332 387 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 AC243772.1-201ENST00000451620 410 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 AC144530.1-201ENST00000452862 555 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDH1Q08174 RPL30P15-201ENST00000457129 321 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 AC079168.1-201ENST00000458741 345 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 AC004801.2-202ENST00000463559 283 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 AC011476.1-201ENST00000466725 307 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 DUTP1-201ENST00000493631 470 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDH1Q08174 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDH1Q08174 RNU6-798P-201ENST00000516912 103 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 AC090136.1-201ENST00000520009 240 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDH1Q08174 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDH1Q08174 AP003122.3-201ENST00000526316 255 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDH1Q08174 AL137161.1-201ENST00000532231 390 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
PCDH1Q08174 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.49□□□□□ -1.53
PCDH1Q08174 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDH1Q08174 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDH1Q08174 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.49□□□□□ -1.53
PCDH1Q08174 AC090607.5-201ENST00000615692 224 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 AC090510.2-201ENST00000617465 629 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDH1Q08174 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.49□□□□□ -1.53
PCDH1Q08174 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.49□□□□□ -1.53
PCDH1Q08174 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDH1Q08174 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDH1Q08174 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
PCDH1Q08174 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
PCDH1Q08174 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDH1Q08174 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
PCDH1Q08174 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
PCDH1Q08174 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.49□□□□□ -1.53
PCDH1Q08174 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDH1Q08174 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDH1Q08174 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
PCDH1Q08174 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDH1Q08174 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.48□□□□□ -1.53
PCDH1Q08174 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
PCDH1Q08174 AL445437.1-201ENST00000623157 3087 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 OR4F13P-202ENST00000560066 2054 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AC011978.2-201ENST00000569835 2054 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.48□□□□□ -1.53
PCDH1Q08174 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDH1Q08174 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
PCDH1Q08174 SNORA64.1-201ENST00000362600 132 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 RNU6-82P-201ENST00000363970 107 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 RN7SKP15-201ENST00000364742 309 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 Y_RNA.452-201ENST00000384202 108 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 MIR568-201ENST00000385036 95 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AC005042.1-201ENST00000393397 800 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 UBE2V1P2-201ENST00000397758 440 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AL049697.2-201ENST00000403708 294 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AL121834.1-202ENST00000404494 277 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 RPS3AP2-201ENST00000407190 754 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDH1Q08174 RPL6P29-201ENST00000414863 865 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDH1Q08174 RPL31P12-201ENST00000422587 358 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.48□□□□□ -1.53
PCDH1Q08174 MTCYBP9-201ENST00000431021 303 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 RPL36AP6-201ENST00000435770 321 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDH1Q08174 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDH1Q08174 AF228730.2-201ENST00000438784 848 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDH1Q08174 LINC02210-201ENST00000444561 288 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AC016696.1-201ENST00000446949 318 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AC018638.3-201ENST00000461273 132 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 RPL7P43-201ENST00000478876 753 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.48□□□□□ -1.53
PCDH1Q08174 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.48□□□□□ -1.53
PCDH1Q08174 AC017037.1-201ENST00000508460 471 ntBASIC5.48□□□□□ -1.53
PCDH1Q08174 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms