Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.98□□□□□ -1.77
LTBQ06643 AC084757.1-201ENST00000559987 490 ntBASIC3.98□□□□□ -1.77
LTBQ06643 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.98□□□□□ -1.77
LTBQ06643 AC017100.2-201ENST00000584628 355 ntBASIC3.98□□□□□ -1.77
LTBQ06643 OR4G1P-201ENST00000588632 938 ntBASIC3.98□□□□□ -1.77
LTBQ06643 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.98□□□□□ -1.77
LTBQ06643 AL606834.2-201ENST00000602954 668 ntBASIC3.98□□□□□ -1.77
LTBQ06643 AC115286.1-201ENST00000604298 434 ntBASIC3.98□□□□□ -1.77
LTBQ06643 AC006566.1-201ENST00000608943 513 ntBASIC3.98□□□□□ -1.77
LTBQ06643 AC092650.2-201ENST00000619984 902 ntBASIC3.98□□□□□ -1.77
LTBQ06643 AC095031.1-201ENST00000623685 672 ntBASIC3.98□□□□□ -1.77
LTBQ06643 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.98□□□□□ -1.77
LTBQ06643 RNA5SP196-201ENST00000625967 102 ntBASIC3.98□□□□□ -1.77
LTBQ06643 AC099654.13-201ENST00000639774 207 ntBASIC3.98□□□□□ -1.77
LTBQ06643 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
LTBQ06643 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
LTBQ06643 RAD17P1-201ENST00000418130 2042 ntBASIC3.98□□□□□ -1.77
LTBQ06643 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LTBQ06643 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.98□□□□□ -1.77
LTBQ06643 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.98□□□□□ -1.77
LTBQ06643 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
LTBQ06643 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
LTBQ06643 CDR1-202ENST00000625883 1485 ntBASIC3.98□□□□□ -1.77
LTBQ06643 AL118496.1-201ENST00000440201 1812 ntBASIC3.98□□□□□ -1.77
LTBQ06643 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LTBQ06643 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
LTBQ06643 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.97□□□□□ -1.77
LTBQ06643 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
LTBQ06643 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.97□□□□□ -1.77
LTBQ06643 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
LTBQ06643 AC105074.1-201ENST00000623380 3095 ntBASIC3.97□□□□□ -1.77
LTBQ06643 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
LTBQ06643 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LTBQ06643 AC008033.1-201ENST00000216407 1162 ntBASIC3.97□□□□□ -1.77
LTBQ06643 RNY4P24-201ENST00000362735 96 ntBASIC3.97□□□□□ -1.77
LTBQ06643 RNU6-501P-201ENST00000364072 100 ntBASIC3.97□□□□□ -1.77
LTBQ06643 OR52E6-202ENST00000379946 954 ntBASIC3.97□□□□□ -1.77
LTBQ06643 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
LTBQ06643 MTCYBP36-201ENST00000404146 440 ntBASIC3.97□□□□□ -1.77
LTBQ06643 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
LTBQ06643 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.97□□□□□ -1.77
LTBQ06643 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.97□□□□□ -1.77
LTBQ06643 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC3.97□□□□□ -1.77
LTBQ06643 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.97□□□□□ -1.77
LTBQ06643 RAB11AP1-201ENST00000442978 646 ntBASIC3.97□□□□□ -1.77
LTBQ06643 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
LTBQ06643 NANOGNBP1-201ENST00000448444 480 ntBASIC3.97□□□□□ -1.77
LTBQ06643 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.97□□□□□ -1.77
LTBQ06643 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.97□□□□□ -1.77
LTBQ06643 RPL23AP12-201ENST00000467573 473 ntBASIC3.97□□□□□ -1.77
LTBQ06643 RPL23AP71-201ENST00000470966 469 ntBASIC3.97□□□□□ -1.77
LTBQ06643 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.97□□□□□ -1.77
LTBQ06643 AC126182.1-201ENST00000478134 357 ntBASIC3.97□□□□□ -1.77
LTBQ06643 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.97□□□□□ -1.77
LTBQ06643 AC006499.6-201ENST00000511169 607 ntBASIC3.97□□□□□ -1.77
LTBQ06643 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.97□□□□□ -1.77
LTBQ06643 RN7SKP283-201ENST00000517197 270 ntBASIC3.97□□□□□ -1.77
LTBQ06643 MYL12AP1-201ENST00000518490 515 ntBASIC3.97□□□□□ -1.77
LTBQ06643 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.97□□□□□ -1.77
LTBQ06643 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC3.97□□□□□ -1.77
LTBQ06643 AC087276.1-201ENST00000529659 480 ntBASIC3.97□□□□□ -1.77
LTBQ06643 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LTBQ06643 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.97□□□□□ -1.77
LTBQ06643 ZNF519P3-201ENST00000557158 1032 ntBASIC3.97□□□□□ -1.77
LTBQ06643 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC3.97□□□□□ -1.77
LTBQ06643 PCMTD1P2-201ENST00000565017 355 ntBASIC3.97□□□□□ -1.77
LTBQ06643 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.97□□□□□ -1.77
LTBQ06643 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.97□□□□□ -1.77
LTBQ06643 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC3.97□□□□□ -1.77
LTBQ06643 U6.42-201ENST00000618440 107 ntBASIC3.97□□□□□ -1.77
LTBQ06643 AP005019.3-201ENST00000620418 560 ntBASIC3.97□□□□□ -1.77
LTBQ06643 AC018816.2-201ENST00000621460 353 ntBASIC3.97□□□□□ -1.77
LTBQ06643 AL356596.1-201ENST00000624230 379 ntBASIC3.97□□□□□ -1.77
LTBQ06643 AC079228.1-201ENST00000624774 1049 ntBASIC3.97□□□□□ -1.77
LTBQ06643 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.97□□□□□ -1.77
LTBQ06643 AC087190.4-201ENST00000574616 8334 ntBASIC3.97□□□□□ -1.77
LTBQ06643 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.97□□□□□ -1.77
LTBQ06643 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
LTBQ06643 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
LTBQ06643 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
LTBQ06643 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
LTBQ06643 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LTBQ06643 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
LTBQ06643 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
LTBQ06643 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC3.97□□□□□ -1.77
LTBQ06643 OR5BR1P-201ENST00000524992 1330 ntBASIC3.96□□□□□ -1.77
LTBQ06643 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.77
LTBQ06643 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.77
LTBQ06643 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
LTBQ06643 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.96□□□□□ -1.78
LTBQ06643 DDX18P3-201ENST00000404856 2007 ntBASIC3.96□□□□□ -1.78
LTBQ06643 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
LTBQ06643 MIR448-201ENST00000362131 111 ntBASIC3.96□□□□□ -1.78
LTBQ06643 RNA5SP52-201ENST00000362448 134 ntBASIC3.96□□□□□ -1.78
LTBQ06643 RNU6-259P-201ENST00000383999 107 ntBASIC3.96□□□□□ -1.78
LTBQ06643 MIR3065-201ENST00000390137 79 ntBASIC3.96□□□□□ -1.78
LTBQ06643 AL121834.1-202ENST00000404494 277 ntBASIC3.96□□□□□ -1.78
LTBQ06643 AL450338.1-201ENST00000407987 512 ntBASIC3.96□□□□□ -1.78
LTBQ06643 RNU6-603P-201ENST00000411403 107 ntBASIC3.96□□□□□ -1.78
LTBQ06643 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms