Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC5.06□□□□□ -1.6
YBX1P67809 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
YBX1P67809 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.06□□□□□ -1.6
YBX1P67809 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
YBX1P67809 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
YBX1P67809 AC092447.10-201ENST00000620607 1652 ntBASIC5.06□□□□□ -1.6
YBX1P67809 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
YBX1P67809 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.06□□□□□ -1.6
YBX1P67809 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.06□□□□□ -1.6
YBX1P67809 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
YBX1P67809 RN7SKP103-201ENST00000363848 320 ntBASIC5.06□□□□□ -1.6
YBX1P67809 RNU4-1-201ENST00000363925 141 ntBASIC5.06□□□□□ -1.6
YBX1P67809 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
YBX1P67809 RNU6-639P-201ENST00000384074 107 ntBASIC5.06□□□□□ -1.6
YBX1P67809 Y_RNA.445-201ENST00000384168 102 ntBASIC5.06□□□□□ -1.6
YBX1P67809 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
YBX1P67809 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.06□□□□□ -1.6
YBX1P67809 AC245054.2-201ENST00000415639 319 ntBASIC5.06□□□□□ -1.6
YBX1P67809 AL451054.2-201ENST00000420896 202 ntBASIC5.06□□□□□ -1.6
YBX1P67809 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC5.06□□□□□ -1.6
YBX1P67809 AL356276.2-201ENST00000435919 558 ntBASIC5.06□□□□□ -1.6
YBX1P67809 AL772161.1-201ENST00000439130 476 ntBASIC5.06□□□□□ -1.6
YBX1P67809 FHP1-201ENST00000442741 703 ntBASIC5.06□□□□□ -1.6
YBX1P67809 AC004980.3-201ENST00000447046 365 ntBASIC5.06□□□□□ -1.6
YBX1P67809 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC5.06□□□□□ -1.6
YBX1P67809 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC5.06□□□□□ -1.6
YBX1P67809 AC009127.1-201ENST00000467090 155 ntBASIC5.06□□□□□ -1.6
YBX1P67809 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.06□□□□□ -1.6
YBX1P67809 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.06□□□□□ -1.6
YBX1P67809 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.06□□□□□ -1.6
YBX1P67809 RPS4XP20-201ENST00000505751 772 ntBASIC5.06□□□□□ -1.6
YBX1P67809 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC5.06□□□□□ -1.6
YBX1P67809 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
YBX1P67809 AC105417.1-201ENST00000514691 285 ntBASIC5.06□□□□□ -1.6
YBX1P67809 RNU6-559P-201ENST00000516151 98 ntBASIC5.06□□□□□ -1.6
YBX1P67809 snoU109.6-201ENST00000516831 118 ntBASIC5.06□□□□□ -1.6
YBX1P67809 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC5.06□□□□□ -1.6
YBX1P67809 MAL2-208ENST00000523307 556 ntTSL 4 BASIC5.06□□□□□ -1.6
YBX1P67809 AC006270.2-201ENST00000578523 652 ntBASIC5.06□□□□□ -1.6
YBX1P67809 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC5.06□□□□□ -1.6
YBX1P67809 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
YBX1P67809 AC098848.2-201ENST00000588023 330 ntBASIC5.06□□□□□ -1.6
YBX1P67809 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
YBX1P67809 AC008814.1-201ENST00000603797 406 ntBASIC5.06□□□□□ -1.6
YBX1P67809 AL391813.2-201ENST00000609113 322 ntBASIC5.06□□□□□ -1.6
YBX1P67809 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.06□□□□□ -1.6
YBX1P67809 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.06□□□□□ -1.6
YBX1P67809 AC009318.4-201ENST00000620496 486 ntBASIC5.06□□□□□ -1.6
YBX1P67809 MTND4LP32-201ENST00000636111 270 ntBASIC5.06□□□□□ -1.6
YBX1P67809 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
YBX1P67809 AC073869.10-201ENST00000642016 354 ntBASIC5.06□□□□□ -1.6
YBX1P67809 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
YBX1P67809 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC5.06□□□□□ -1.6
YBX1P67809 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.06□□□□□ -1.6
YBX1P67809 AC092747.4-201ENST00000620519 1861 ntBASIC5.06□□□□□ -1.6
YBX1P67809 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
YBX1P67809 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
YBX1P67809 AC100778.3-201ENST00000580060 1750 ntBASIC5.06□□□□□ -1.6
YBX1P67809 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
YBX1P67809 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC5.06□□□□□ -1.6
YBX1P67809 AC066616.2-201ENST00000559334 1481 ntBASIC5.06□□□□□ -1.6
YBX1P67809 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.06□□□□□ -1.6
YBX1P67809 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
YBX1P67809 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
YBX1P67809 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
YBX1P67809 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
YBX1P67809 AC010266.2-201ENST00000564741 3255 ntBASIC5.05□□□□□ -1.6
YBX1P67809 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
YBX1P67809 RPL23P2-201ENST00000320371 421 ntBASIC5.05□□□□□ -1.6
YBX1P67809 U3.3-201ENST00000362986 216 ntBASIC5.05□□□□□ -1.6
YBX1P67809 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
YBX1P67809 RNU6-1297P-201ENST00000384415 104 ntBASIC5.05□□□□□ -1.6
YBX1P67809 SNORD37.1-201ENST00000390968 65 ntBASIC5.05□□□□□ -1.6
YBX1P67809 SNORA48.4-201ENST00000391089 134 ntBASIC5.05□□□□□ -1.6
YBX1P67809 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.05□□□□□ -1.6
YBX1P67809 Y_RNA.615-201ENST00000410769 117 ntBASIC5.05□□□□□ -1.6
YBX1P67809 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.05□□□□□ -1.6
YBX1P67809 GSTM3P2-201ENST00000412746 530 ntBASIC5.05□□□□□ -1.6
YBX1P67809 PRELID3BP11-201ENST00000414230 479 ntBASIC5.05□□□□□ -1.6
YBX1P67809 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.05□□□□□ -1.6
YBX1P67809 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC5.05□□□□□ -1.6
YBX1P67809 RPS15AP12-201ENST00000419498 388 ntBASIC5.05□□□□□ -1.6
YBX1P67809 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.05□□□□□ -1.6
YBX1P67809 REREP1Y-201ENST00000422655 198 ntBASIC5.05□□□□□ -1.6
YBX1P67809 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.05□□□□□ -1.6
YBX1P67809 AL139148.1-201ENST00000427122 680 ntBASIC5.05□□□□□ -1.6
YBX1P67809 AC006548.1-201ENST00000427470 102 ntBASIC5.05□□□□□ -1.6
YBX1P67809 REREP2Y-201ENST00000439103 200 ntBASIC5.05□□□□□ -1.6
YBX1P67809 RPL36AP15-201ENST00000444514 266 ntBASIC5.05□□□□□ -1.6
YBX1P67809 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
YBX1P67809 RN7SL172P-201ENST00000460535 303 ntBASIC5.05□□□□□ -1.6
YBX1P67809 APOOP2-201ENST00000461561 539 ntBASIC5.05□□□□□ -1.6
YBX1P67809 HMGN2P26-201ENST00000463169 339 ntBASIC5.05□□□□□ -1.6
YBX1P67809 AC005532.2-201ENST00000467154 373 ntBASIC5.05□□□□□ -1.6
YBX1P67809 AC006512.1-201ENST00000468816 291 ntBASIC5.05□□□□□ -1.6
YBX1P67809 PABPC1P3-201ENST00000469174 459 ntBASIC5.05□□□□□ -1.6
YBX1P67809 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.05□□□□□ -1.6
YBX1P67809 AL163973.1-201ENST00000484753 577 ntBASIC5.05□□□□□ -1.6
YBX1P67809 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.05□□□□□ -1.6
YBX1P67809 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms