Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PMS1P54277 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PMS1P54277 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
PMS1P54277 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
PMS1P54277 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
PMS1P54277 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PMS1P54277 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PMS1P54277 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PMS1P54277 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PMS1P54277 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PMS1P54277 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PMS1P54277 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.41□□□□□ -1.54
PMS1P54277 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PMS1P54277 RNU4-73P-201ENST00000363164 141 ntBASIC5.41□□□□□ -1.54
PMS1P54277 U8.4-201ENST00000363626 134 ntBASIC5.41□□□□□ -1.54
PMS1P54277 RNU4-1-201ENST00000363925 141 ntBASIC5.41□□□□□ -1.54
PMS1P54277 RNA5SP435-201ENST00000364044 108 ntBASIC5.41□□□□□ -1.54
PMS1P54277 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
PMS1P54277 RNU6-1207P-201ENST00000384343 107 ntBASIC5.41□□□□□ -1.54
PMS1P54277 MIR223-201ENST00000385204 110 ntBASIC5.41□□□□□ -1.54
PMS1P54277 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC5.41□□□□□ -1.54
PMS1P54277 TBCAP2-201ENST00000416175 326 ntBASIC5.41□□□□□ -1.54
PMS1P54277 RPS15AP12-201ENST00000419498 388 ntBASIC5.41□□□□□ -1.54
PMS1P54277 SDCBPP3-201ENST00000419629 891 ntBASIC5.41□□□□□ -1.54
PMS1P54277 AL592293.2-201ENST00000422292 996 ntBASIC5.41□□□□□ -1.54
PMS1P54277 EIF1P3-201ENST00000423841 334 ntBASIC5.41□□□□□ -1.54
PMS1P54277 RPS26P47-201ENST00000427219 348 ntBASIC5.41□□□□□ -1.54
PMS1P54277 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC5.41□□□□□ -1.54
PMS1P54277 AL606489.2-201ENST00000433886 234 ntBASIC5.41□□□□□ -1.54
PMS1P54277 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.41□□□□□ -1.54
PMS1P54277 BNIP3P2-201ENST00000441221 577 ntBASIC5.41□□□□□ -1.54
PMS1P54277 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.41□□□□□ -1.54
PMS1P54277 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.41□□□□□ -1.54
PMS1P54277 snoU13.8-201ENST00000458890 104 ntBASIC5.41□□□□□ -1.54
PMS1P54277 AC005532.2-201ENST00000467154 373 ntBASIC5.41□□□□□ -1.54
PMS1P54277 RN7SL727P-201ENST00000482164 296 ntBASIC5.41□□□□□ -1.54
PMS1P54277 RN7SL30P-201ENST00000488416 306 ntBASIC5.41□□□□□ -1.54
PMS1P54277 RPL39P36-201ENST00000490784 156 ntBASIC5.41□□□□□ -1.54
PMS1P54277 NDUFA5P12-201ENST00000503796 343 ntBASIC5.41□□□□□ -1.54
PMS1P54277 Y_RNA.675-201ENST00000516389 149 ntBASIC5.41□□□□□ -1.54
PMS1P54277 RN7SKP260-201ENST00000516907 149 ntBASIC5.41□□□□□ -1.54
PMS1P54277 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.41□□□□□ -1.54
PMS1P54277 PHBP17-201ENST00000528576 541 ntBASIC5.41□□□□□ -1.54
PMS1P54277 BRD9P1-201ENST00000529855 560 ntBASIC5.41□□□□□ -1.54
PMS1P54277 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.41□□□□□ -1.54
PMS1P54277 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC5.41□□□□□ -1.54
PMS1P54277 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.41□□□□□ -1.54
PMS1P54277 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PMS1P54277 AC090615.1-201ENST00000577519 154 ntBASIC5.41□□□□□ -1.54
PMS1P54277 RN7SL802P-201ENST00000577858 299 ntBASIC5.41□□□□□ -1.54
PMS1P54277 MIR3691-201ENST00000578066 90 ntBASIC5.41□□□□□ -1.54
PMS1P54277 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.41□□□□□ -1.54
PMS1P54277 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.41□□□□□ -1.54
PMS1P54277 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.41□□□□□ -1.54
PMS1P54277 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.41□□□□□ -1.54
PMS1P54277 AC025449.1-201ENST00000603896 529 ntBASIC5.41□□□□□ -1.54
PMS1P54277 Z84480.1-201ENST00000605131 311 ntBASIC5.41□□□□□ -1.54
PMS1P54277 AL355472.4-201ENST00000610233 626 ntBASIC5.41□□□□□ -1.54
PMS1P54277 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.41□□□□□ -1.54
PMS1P54277 AC116447.1-201ENST00000613153 453 ntBASIC5.41□□□□□ -1.54
PMS1P54277 AL512624.1-201ENST00000613638 469 ntBASIC5.41□□□□□ -1.54
PMS1P54277 MIR6864-201ENST00000617935 70 ntBASIC5.41□□□□□ -1.54
PMS1P54277 MIR6886-201ENST00000619864 61 ntBASIC5.41□□□□□ -1.54
PMS1P54277 AC112487.2-201ENST00000637950 304 ntBASIC5.41□□□□□ -1.54
PMS1P54277 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PMS1P54277 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PMS1P54277 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PMS1P54277 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PMS1P54277 THAP12P4-201ENST00000528321 2266 ntBASIC5.41□□□□□ -1.54
PMS1P54277 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.41□□□□□ -1.54
PMS1P54277 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PMS1P54277 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.41□□□□□ -1.54
PMS1P54277 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
PMS1P54277 AL672167.1-205ENST00000641112 3080 ntBASIC5.41□□□□□ -1.54
PMS1P54277 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PMS1P54277 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.41□□□□□ -1.54
PMS1P54277 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.41□□□□□ -1.54
PMS1P54277 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PMS1P54277 AC114546.3-201ENST00000623582 1734 ntBASIC5.4□□□□□ -1.54
PMS1P54277 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PMS1P54277 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PMS1P54277 AL592148.3-201ENST00000608771 2646 ntBASIC5.4□□□□□ -1.54
PMS1P54277 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.4□□□□□ -1.54
PMS1P54277 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.4□□□□□ -1.54
PMS1P54277 RNU6-1243P-201ENST00000364028 107 ntBASIC5.4□□□□□ -1.54
PMS1P54277 RNY4P16-201ENST00000364768 94 ntBASIC5.4□□□□□ -1.54
PMS1P54277 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.4□□□□□ -1.54
PMS1P54277 RNU6-767P-201ENST00000384132 107 ntBASIC5.4□□□□□ -1.54
PMS1P54277 Y_RNA.529-201ENST00000384586 119 ntBASIC5.4□□□□□ -1.54
PMS1P54277 RNU6-178P-201ENST00000384631 104 ntBASIC5.4□□□□□ -1.54
PMS1P54277 RNA5SP345-201ENST00000410646 108 ntBASIC5.4□□□□□ -1.54
PMS1P54277 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC5.4□□□□□ -1.54
PMS1P54277 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.4□□□□□ -1.54
PMS1P54277 AC012065.2-201ENST00000421295 375 ntBASIC5.4□□□□□ -1.54
PMS1P54277 EIF4HP2-201ENST00000424380 563 ntBASIC5.4□□□□□ -1.54
PMS1P54277 AC007283.2-201ENST00000424739 197 ntBASIC5.4□□□□□ -1.54
PMS1P54277 OR2B7P-201ENST00000429302 934 ntBASIC5.4□□□□□ -1.54
PMS1P54277 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.4□□□□□ -1.54
PMS1P54277 AC114495.1-201ENST00000441274 436 ntBASIC5.4□□□□□ -1.54
PMS1P54277 RPL7P52-201ENST00000449200 742 ntBASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms