Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LIMK2P53671 Vault.1-201ENST00000516474 102 ntBASIC3.69□□□□□ -1.82
LIMK2P53671 RNU4-60P-201ENST00000517239 135 ntBASIC3.69□□□□□ -1.82
LIMK2P53671 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.69□□□□□ -1.82
LIMK2P53671 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.69□□□□□ -1.82
LIMK2P53671 OR10V3P-201ENST00000525712 725 ntBASIC3.69□□□□□ -1.82
LIMK2P53671 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.69□□□□□ -1.82
LIMK2P53671 OR8L1P-201ENST00000534005 955 ntBASIC3.69□□□□□ -1.82
LIMK2P53671 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.69□□□□□ -1.82
LIMK2P53671 AL121766.1-201ENST00000547436 487 ntBASIC3.69□□□□□ -1.82
LIMK2P53671 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.69□□□□□ -1.82
LIMK2P53671 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LIMK2P53671 AC019176.2-201ENST00000611579 315 ntBASIC3.69□□□□□ -1.82
LIMK2P53671 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.69□□□□□ -1.82
LIMK2P53671 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.69□□□□□ -1.82
LIMK2P53671 AC104985.3-201ENST00000623479 597 ntBASIC3.69□□□□□ -1.82
LIMK2P53671 AC120349.3-201ENST00000624377 529 ntBASIC3.69□□□□□ -1.82
LIMK2P53671 AP001486.2-201ENST00000561652 5113 ntBASIC3.69□□□□□ -1.82
LIMK2P53671 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
LIMK2P53671 AL355578.1-201ENST00000607405 1328 ntBASIC3.69□□□□□ -1.82
LIMK2P53671 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LIMK2P53671 AC073073.2-201ENST00000609827 2578 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 MTCO1P24-201ENST00000515438 1558 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
LIMK2P53671 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
LIMK2P53671 MTND5P31-201ENST00000419366 1374 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 AC090337.1-201ENST00000579651 2074 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LIMK2P53671 RNU6-906P-201ENST00000384700 70 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 AC007066.1-201ENST00000392902 381 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 MTCO3P31-201ENST00000405526 789 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.68□□□□□ -1.82
LIMK2P53671 SYF2P2-201ENST00000417620 583 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 MTCO2P21-201ENST00000419780 677 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 AL035423.1-201ENST00000420331 213 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.68□□□□□ -1.82
LIMK2P53671 USP9YP24-201ENST00000434374 697 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 B3GNT2P1-201ENST00000434960 952 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.68□□□□□ -1.82
LIMK2P53671 USP9YP17-201ENST00000444617 696 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
LIMK2P53671 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.68□□□□□ -1.82
LIMK2P53671 RPL6P9-201ENST00000466502 859 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 RPS3AP50-201ENST00000487064 803 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.68□□□□□ -1.82
LIMK2P53671 AC011352.3-201ENST00000505162 593 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.68□□□□□ -1.82
LIMK2P53671 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.68□□□□□ -1.82
LIMK2P53671 RNA5SP135-201ENST00000517019 125 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 AC023632.1-201ENST00000518463 375 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 DUXAP2-201ENST00000519198 589 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LIMK2P53671 AP000619.3-201ENST00000535634 1127 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.68□□□□□ -1.82
LIMK2P53671 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
LIMK2P53671 AC008011.1-201ENST00000545989 227 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.68□□□□□ -1.82
LIMK2P53671 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.68□□□□□ -1.82
LIMK2P53671 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.68□□□□□ -1.82
LIMK2P53671 AC245036.5-201ENST00000596330 847 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.68□□□□□ -1.82
LIMK2P53671 Z82195.1-201ENST00000604558 398 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 AP005137.2-201ENST00000609238 400 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.68□□□□□ -1.82
LIMK2P53671 AL391261.4-201ENST00000616012 481 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
LIMK2P53671 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
LIMK2P53671 AC022079.1-201ENST00000621546 602 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 AC011330.2-201ENST00000621680 635 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.68□□□□□ -1.82
LIMK2P53671 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.68□□□□□ -1.82
LIMK2P53671 AP000553.6-201ENST00000641242 118 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 AL732372.2-225ENST00000642124 456 ntBASIC3.68□□□□□ -1.82
LIMK2P53671 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.68□□□□□ -1.82
LIMK2P53671 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.68□□□□□ -1.82
LIMK2P53671 HSPA8P1-201ENST00000425843 1833 ntBASIC3.67□□□□□ -1.82
LIMK2P53671 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LIMK2P53671 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
LIMK2P53671 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LIMK2P53671 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LIMK2P53671 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
LIMK2P53671 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
LIMK2P53671 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
LIMK2P53671 MTHFD2P2-201ENST00000407725 247 ntBASIC3.67□□□□□ -1.82
LIMK2P53671 AL449283.1-202ENST00000418249 604 ntBASIC3.67□□□□□ -1.82
LIMK2P53671 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.67□□□□□ -1.82
LIMK2P53671 PSMA2P3-201ENST00000429685 675 ntBASIC3.67□□□□□ -1.82
LIMK2P53671 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LIMK2P53671 USP9YP7-201ENST00000436723 430 ntBASIC3.67□□□□□ -1.82
LIMK2P53671 MTCYBP31-201ENST00000438855 1122 ntBASIC3.67□□□□□ -1.82
LIMK2P53671 Z73417.1-201ENST00000447373 778 ntBASIC3.67□□□□□ -1.82
LIMK2P53671 USP9YP32-201ENST00000452432 430 ntBASIC3.67□□□□□ -1.82
LIMK2P53671 AC092155.2-201ENST00000454675 477 ntBASIC3.67□□□□□ -1.82
LIMK2P53671 SNRPGP5-201ENST00000456003 220 ntBASIC3.67□□□□□ -1.82
LIMK2P53671 AC134050.1-201ENST00000495088 933 ntBASIC3.67□□□□□ -1.82
LIMK2P53671 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.67□□□□□ -1.82
LIMK2P53671 AC026784.1-201ENST00000507986 352 ntBASIC3.67□□□□□ -1.82
LIMK2P53671 AC109471.1-201ENST00000511631 612 ntBASIC3.67□□□□□ -1.82
LIMK2P53671 USP9YP5-201ENST00000511770 630 ntBASIC3.67□□□□□ -1.82
LIMK2P53671 AC093755.1-201ENST00000512950 1023 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 117.9 ms