Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 SNRPEP4-201ENST00000435815 279 ntBASIC2.78□□□□□ -1.96
GTF2A1P52655 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.78□□□□□ -1.96
GTF2A1P52655 AL031663.1-201ENST00000437445 219 ntBASIC2.78□□□□□ -1.96
GTF2A1P52655 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.78□□□□□ -1.96
GTF2A1P52655 AL162389.1-201ENST00000449233 177 ntBASIC2.78□□□□□ -1.96
GTF2A1P52655 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC2.78□□□□□ -1.96
GTF2A1P52655 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
GTF2A1P52655 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC2.78□□□□□ -1.96
GTF2A1P52655 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.78□□□□□ -1.96
GTF2A1P52655 RNU6-1073P-201ENST00000517182 106 ntBASIC2.78□□□□□ -1.96
GTF2A1P52655 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC2.78□□□□□ -1.96
GTF2A1P52655 OR7K1P-201ENST00000546439 926 ntBASIC2.78□□□□□ -1.96
GTF2A1P52655 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC2.78□□□□□ -1.96
GTF2A1P52655 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.78□□□□□ -1.96
GTF2A1P52655 VIS1.1-201ENST00000610517 203 ntBASIC2.78□□□□□ -1.96
GTF2A1P52655 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.78□□□□□ -1.96
GTF2A1P52655 RMST_5.1-201ENST00000618704 126 ntBASIC2.78□□□□□ -1.96
GTF2A1P52655 AC243312.2-201ENST00000623340 601 ntBASIC2.78□□□□□ -1.96
GTF2A1P52655 AP003072.5-201ENST00000623872 773 ntBASIC2.78□□□□□ -1.96
GTF2A1P52655 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
GTF2A1P52655 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
GTF2A1P52655 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
GTF2A1P52655 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
GTF2A1P52655 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
GTF2A1P52655 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.77□□□□□ -1.97
GTF2A1P52655 AL512633.1-201ENST00000399931 655 ntBASIC2.77□□□□□ -1.97
GTF2A1P52655 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.77□□□□□ -1.97
GTF2A1P52655 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.77□□□□□ -1.97
GTF2A1P52655 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.77□□□□□ -1.97
GTF2A1P52655 AC063979.1-201ENST00000415539 377 ntBASIC2.77□□□□□ -1.97
GTF2A1P52655 AL513477.1-202ENST00000417061 214 ntBASIC2.77□□□□□ -1.97
GTF2A1P52655 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.77□□□□□ -1.97
GTF2A1P52655 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC2.77□□□□□ -1.97
GTF2A1P52655 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.77□□□□□ -1.97
GTF2A1P52655 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC2.77□□□□□ -1.97
GTF2A1P52655 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.77□□□□□ -1.97
GTF2A1P52655 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.77□□□□□ -1.97
GTF2A1P52655 AC122718.1-201ENST00000439448 744 ntBASIC2.77□□□□□ -1.97
GTF2A1P52655 AC092641.1-201ENST00000440229 772 ntBASIC2.77□□□□□ -1.97
GTF2A1P52655 RPL23AP33-201ENST00000442301 452 ntBASIC2.77□□□□□ -1.97
GTF2A1P52655 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC2.77□□□□□ -1.97
GTF2A1P52655 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC2.77□□□□□ -1.97
GTF2A1P52655 HMGB1P25-201ENST00000468402 607 ntBASIC2.77□□□□□ -1.97
GTF2A1P52655 AC091959.2-201ENST00000477363 321 ntBASIC2.77□□□□□ -1.97
GTF2A1P52655 RPS3AP43-201ENST00000479743 781 ntBASIC2.77□□□□□ -1.97
GTF2A1P52655 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC2.77□□□□□ -1.97
GTF2A1P52655 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC2.77□□□□□ -1.97
GTF2A1P52655 AC008565.1-201ENST00000509046 885 ntBASIC2.77□□□□□ -1.97
GTF2A1P52655 RNA5SP468-201ENST00000516782 93 ntBASIC2.77□□□□□ -1.97
GTF2A1P52655 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.77□□□□□ -1.97
GTF2A1P52655 OR5B10P-201ENST00000532869 642 ntBASIC2.77□□□□□ -1.97
GTF2A1P52655 HIGD1AP1-201ENST00000550979 275 ntBASIC2.77□□□□□ -1.97
GTF2A1P52655 RPL21P12-201ENST00000559810 515 ntBASIC2.77□□□□□ -1.97
GTF2A1P52655 MIR4700-201ENST00000578311 74 ntBASIC2.77□□□□□ -1.97
GTF2A1P52655 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC2.77□□□□□ -1.97
GTF2A1P52655 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC2.77□□□□□ -1.97
GTF2A1P52655 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.77□□□□□ -1.97
GTF2A1P52655 AC055764.2-201ENST00000610089 670 ntBASIC2.77□□□□□ -1.97
GTF2A1P52655 AC100793.4-201ENST00000613683 429 ntBASIC2.77□□□□□ -1.97
GTF2A1P52655 METTL8-218ENST00000638989 876 ntTSL 5 BASIC2.77□□□□□ -1.97
GTF2A1P52655 METTL8-219ENST00000640734 726 ntTSL 2 BASIC2.77□□□□□ -1.97
GTF2A1P52655 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
GTF2A1P52655 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
GTF2A1P52655 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
GTF2A1P52655 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
GTF2A1P52655 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
GTF2A1P52655 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
GTF2A1P52655 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
GTF2A1P52655 RAB9AP3-201ENST00000412737 573 ntBASIC2.76□□□□□ -1.97
GTF2A1P52655 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC2.76□□□□□ -1.97
GTF2A1P52655 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC2.76□□□□□ -1.97
GTF2A1P52655 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC2.76□□□□□ -1.97
GTF2A1P52655 HSPD1P21-201ENST00000436541 245 ntBASIC2.76□□□□□ -1.97
GTF2A1P52655 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC2.76□□□□□ -1.97
GTF2A1P52655 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
GTF2A1P52655 RAB9AP1-201ENST00000449393 573 ntBASIC2.76□□□□□ -1.97
GTF2A1P52655 RBM43P1-201ENST00000476891 1081 ntBASIC2.76□□□□□ -1.97
GTF2A1P52655 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC2.76□□□□□ -1.97
GTF2A1P52655 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.76□□□□□ -1.97
GTF2A1P52655 AC087808.1-201ENST00000520501 361 ntBASIC2.76□□□□□ -1.97
GTF2A1P52655 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC2.76□□□□□ -1.97
GTF2A1P52655 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC2.76□□□□□ -1.97
GTF2A1P52655 MIR5186-201ENST00000577504 120 ntBASIC2.76□□□□□ -1.97
GTF2A1P52655 AC007448.1-201ENST00000582714 234 ntBASIC2.76□□□□□ -1.97
GTF2A1P52655 AC245036.5-201ENST00000596330 847 ntBASIC2.76□□□□□ -1.97
GTF2A1P52655 VN1R78P-201ENST00000597393 564 ntBASIC2.76□□□□□ -1.97
GTF2A1P52655 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC2.76□□□□□ -1.97
GTF2A1P52655 AC009039.2-201ENST00000624524 529 ntBASIC2.76□□□□□ -1.97
GTF2A1P52655 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.76□□□□□ -1.97
GTF2A1P52655 AC244258.1-201ENST00000637553 1071 ntBASIC2.76□□□□□ -1.97
GTF2A1P52655 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.76□□□□□ -1.97
GTF2A1P52655 AL122126.1-201ENST00000546905 1318 ntBASIC2.75□□□□□ -1.97
GTF2A1P52655 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
GTF2A1P52655 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
GTF2A1P52655 RNU6-50P-201ENST00000362356 103 ntBASIC2.75□□□□□ -1.97
GTF2A1P52655 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
GTF2A1P52655 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
GTF2A1P52655 AC007064.1-201ENST00000412238 351 ntBASIC2.75□□□□□ -1.97
GTF2A1P52655 RPS7P15-201ENST00000415804 584 ntBASIC2.75□□□□□ -1.97
GTF2A1P52655 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms