Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC3.02□□□□□ -1.93
CX3CR1P49238 RNU1-61P-201ENST00000516107 151 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.02□□□□□ -1.93
CX3CR1P49238 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.02□□□□□ -1.93
CX3CR1P49238 MTCO1P40-201ENST00000574371 625 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 AC008507.1-201ENST00000587506 734 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 AC020914.6-201ENST00000594327 272 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 AC009948.4-201ENST00000604692 675 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 AC128687.1-201ENST00000605304 619 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 AC011816.2-201ENST00000607089 556 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 AC107294.3-201ENST00000609211 526 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 AC092650.2-201ENST00000619984 902 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 AC097372.4-201ENST00000625025 466 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.02□□□□□ -1.93
CX3CR1P49238 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CX3CR1P49238 AC032011.1-201ENST00000611703 1549 ntBASIC3.02□□□□□ -1.93
CX3CR1P49238 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.02□□□□□ -1.93
CX3CR1P49238 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CX3CR1P49238 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.01□□□□□ -1.93
CX3CR1P49238 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CX3CR1P49238 AL365440.1-201ENST00000436135 2167 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 ZNF849P-201ENST00000594711 1566 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CX3CR1P49238 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
CX3CR1P49238 RNA5SP479-201ENST00000364858 117 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 RNU6-619P-201ENST00000365146 108 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.01□□□□□ -1.93
CX3CR1P49238 GSTA8P-201ENST00000404253 637 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 MIR1193-201ENST00000408109 78 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 RN7SKP159-201ENST00000410657 292 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 CYCSP19-201ENST00000411715 316 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 AC126124.2-201ENST00000413542 321 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC3.01□□□□□ -1.93
CX3CR1P49238 RPS6P14-201ENST00000425165 719 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 AP000907.1-201ENST00000428428 510 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.01□□□□□ -1.93
CX3CR1P49238 AC097262.1-201ENST00000452559 548 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 AC073387.1-201ENST00000453261 709 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.01□□□□□ -1.93
CX3CR1P49238 AC007967.1-201ENST00000455422 1159 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 HMGN1P18-201ENST00000457642 277 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 ARPC3P2-201ENST00000457786 533 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.01□□□□□ -1.93
CX3CR1P49238 AP002884.2-201ENST00000471647 395 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 AC010301.1-201ENST00000473936 355 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.01□□□□□ -1.93
CX3CR1P49238 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CX3CR1P49238 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CX3CR1P49238 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CX3CR1P49238 MTCYBP37-201ENST00000510642 1133 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 AC104619.4-201ENST00000510773 249 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CX3CR1P49238 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.01□□□□□ -1.93
CX3CR1P49238 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.01□□□□□ -1.93
CX3CR1P49238 AP000790.1-201ENST00000528891 737 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.01□□□□□ -1.93
CX3CR1P49238 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.01□□□□□ -1.93
CX3CR1P49238 GTF2IP22-201ENST00000554443 182 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 AL109653.1-201ENST00000603091 248 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.01□□□□□ -1.93
CX3CR1P49238 MIR7851-201ENST00000610611 160 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CX3CR1P49238 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.01□□□□□ -1.93
CX3CR1P49238 AF117829.1-206ENST00000621883 3802 ntBASIC3.01□□□□□ -1.93
CX3CR1P49238 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CX3CR1P49238 AC111188.2-201ENST00000529697 1387 ntBASIC3□□□□□ -1.93
CX3CR1P49238 AC007496.3-201ENST00000624987 3443 ntBASIC3□□□□□ -1.93
CX3CR1P49238 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3□□□□□ -1.93
CX3CR1P49238 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3□□□□□ -1.93
CX3CR1P49238 ZNF826P-207ENST00000622273 1910 ntBASIC3□□□□□ -1.93
CX3CR1P49238 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3□□□□□ -1.93
CX3CR1P49238 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CX3CR1P49238 Y_RNA.110-201ENST00000363220 99 ntBASIC3□□□□□ -1.93
CX3CR1P49238 OR1L1-202ENST00000373686 1083 ntBASIC3□□□□□ -1.93
CX3CR1P49238 RNU6-821P-201ENST00000390995 107 ntBASIC3□□□□□ -1.93
CX3CR1P49238 AL121978.1-201ENST00000402778 359 ntBASIC3□□□□□ -1.93
CX3CR1P49238 RSL24D1P1-201ENST00000404972 493 ntBASIC3□□□□□ -1.93
CX3CR1P49238 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3□□□□□ -1.93
CX3CR1P49238 MTATP6P19-201ENST00000413797 659 ntBASIC3□□□□□ -1.93
CX3CR1P49238 Z99755.1-201ENST00000414048 380 ntBASIC3□□□□□ -1.93
CX3CR1P49238 BX664727.1-201ENST00000416024 466 ntBASIC3□□□□□ -1.93
CX3CR1P49238 YPEL5P1-201ENST00000419731 367 ntBASIC3□□□□□ -1.93
CX3CR1P49238 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3□□□□□ -1.93
CX3CR1P49238 GTF2IP23-201ENST00000423746 351 ntBASIC3□□□□□ -1.93
CX3CR1P49238 BX890604.2-201ENST00000427883 474 ntBASIC3□□□□□ -1.93
CX3CR1P49238 OFD1P12Y-201ENST00000427963 1207 ntBASIC3□□□□□ -1.93
CX3CR1P49238 OFD1P13Y-201ENST00000431179 1232 ntBASIC3□□□□□ -1.93
CX3CR1P49238 AL035246.1-201ENST00000433554 1255 ntBASIC3□□□□□ -1.93
CX3CR1P49238 AC234064.1-201ENST00000436312 247 ntBASIC3□□□□□ -1.93
CX3CR1P49238 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3□□□□□ -1.93
CX3CR1P49238 AC008264.1-201ENST00000447612 367 ntBASIC3□□□□□ -1.93
CX3CR1P49238 NDUFA5P7-201ENST00000452914 242 ntBASIC3□□□□□ -1.93
CX3CR1P49238 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3□□□□□ -1.93
CX3CR1P49238 RNU7-140P-201ENST00000459546 60 ntBASIC3□□□□□ -1.93
CX3CR1P49238 KCTD9P5-201ENST00000504141 1170 ntBASIC3□□□□□ -1.93
CX3CR1P49238 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3□□□□□ -1.93
CX3CR1P49238 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3□□□□□ -1.93
CX3CR1P49238 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3□□□□□ -1.93
CX3CR1P49238 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3□□□□□ -1.93
CX3CR1P49238 AC121161.1-201ENST00000510606 652 ntBASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms