Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 CRYBB2P1-203ENST00000415709 538 ntBASIC3.46□□□□□ -1.86
CDX1P47902 TMSB10P2-201ENST00000416049 131 ntBASIC3.46□□□□□ -1.86
CDX1P47902 AC010099.3-201ENST00000423896 409 ntBASIC3.46□□□□□ -1.86
CDX1P47902 ZYG11AP1-201ENST00000430329 837 ntBASIC3.46□□□□□ -1.86
CDX1P47902 RPS29P17-201ENST00000430795 166 ntBASIC3.46□□□□□ -1.86
CDX1P47902 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.46□□□□□ -1.86
CDX1P47902 PHBP16-201ENST00000446318 950 ntBASIC3.46□□□□□ -1.86
CDX1P47902 RPL23AP35-201ENST00000451906 501 ntBASIC3.46□□□□□ -1.86
CDX1P47902 ANP32BP2-201ENST00000454525 545 ntBASIC3.46□□□□□ -1.86
CDX1P47902 RN7SL98P-201ENST00000462271 300 ntBASIC3.46□□□□□ -1.86
CDX1P47902 RN7SL303P-201ENST00000469773 251 ntBASIC3.46□□□□□ -1.86
CDX1P47902 AC007537.2-201ENST00000472093 511 ntBASIC3.46□□□□□ -1.86
CDX1P47902 RN7SL812P-201ENST00000493791 279 ntBASIC3.46□□□□□ -1.86
CDX1P47902 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.46□□□□□ -1.86
CDX1P47902 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.46□□□□□ -1.86
CDX1P47902 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.46□□□□□ -1.86
CDX1P47902 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.46□□□□□ -1.86
CDX1P47902 ATP1B1P1-201ENST00000509767 915 ntBASIC3.46□□□□□ -1.86
CDX1P47902 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.46□□□□□ -1.86
CDX1P47902 SNORA3.4-201ENST00000515969 96 ntBASIC3.46□□□□□ -1.86
CDX1P47902 RNU6-1231P-201ENST00000517185 103 ntBASIC3.46□□□□□ -1.86
CDX1P47902 IGLVIV-65-201ENST00000517313 360 ntBASIC3.46□□□□□ -1.86
CDX1P47902 AC105185.1-201ENST00000518705 535 ntBASIC3.46□□□□□ -1.86
CDX1P47902 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.46□□□□□ -1.86
CDX1P47902 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.46□□□□□ -1.86
CDX1P47902 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.46□□□□□ -1.86
CDX1P47902 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDX1P47902 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.46□□□□□ -1.86
CDX1P47902 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.46□□□□□ -1.86
CDX1P47902 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.46□□□□□ -1.86
CDX1P47902 MTATP6P24-201ENST00000576835 677 ntBASIC3.46□□□□□ -1.86
CDX1P47902 AC090615.1-201ENST00000577519 154 ntBASIC3.46□□□□□ -1.86
CDX1P47902 AC006539.2-201ENST00000601729 572 ntBASIC3.46□□□□□ -1.86
CDX1P47902 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.46□□□□□ -1.86
CDX1P47902 AC079587.1-201ENST00000603846 277 ntBASIC3.46□□□□□ -1.86
CDX1P47902 AL031176.1-201ENST00000604554 466 ntBASIC3.46□□□□□ -1.86
CDX1P47902 AC010201.1-201ENST00000605051 540 ntBASIC3.46□□□□□ -1.86
CDX1P47902 AC112220.3-201ENST00000605502 502 ntBASIC3.46□□□□□ -1.86
CDX1P47902 AL390208.1-201ENST00000605885 644 ntBASIC3.46□□□□□ -1.86
CDX1P47902 AC021755.4-201ENST00000616620 456 ntBASIC3.46□□□□□ -1.86
CDX1P47902 MIR6810-201ENST00000622701 70 ntBASIC3.46□□□□□ -1.86
CDX1P47902 AC008785.1-201ENST00000624475 456 ntBASIC3.46□□□□□ -1.86
CDX1P47902 AC244205.2-202ENST00000635781 342 ntBASIC3.46□□□□□ -1.86
CDX1P47902 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.46□□□□□ -1.86
CDX1P47902 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CDX1P47902 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.46□□□□□ -1.86
CDX1P47902 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.45□□□□□ -1.86
CDX1P47902 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDX1P47902 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.45□□□□□ -1.86
CDX1P47902 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDX1P47902 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
CDX1P47902 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDX1P47902 MFF-206ENST00000392059 1710 ntTSL 5 BASIC3.45□□□□□ -1.86
CDX1P47902 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDX1P47902 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDX1P47902 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDX1P47902 AC139769.1-204ENST00000472297 1931 ntBASIC3.45□□□□□ -1.86
CDX1P47902 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CDX1P47902 OR11H4-201ENST00000315409 1082 ntBASIC3.45□□□□□ -1.86
CDX1P47902 RNU6-1214P-201ENST00000363650 109 ntBASIC3.45□□□□□ -1.86
CDX1P47902 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.45□□□□□ -1.86
CDX1P47902 AL356131.1-201ENST00000405826 414 ntBASIC3.45□□□□□ -1.86
CDX1P47902 RNU4-25P-201ENST00000410569 230 ntBASIC3.45□□□□□ -1.86
CDX1P47902 RNU2-71P-201ENST00000411395 189 ntBASIC3.45□□□□□ -1.86
CDX1P47902 AC011933.1-201ENST00000413334 321 ntBASIC3.45□□□□□ -1.86
CDX1P47902 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC3.45□□□□□ -1.86
CDX1P47902 AC009237.5-201ENST00000414271 501 ntBASIC3.45□□□□□ -1.86
CDX1P47902 AC099677.1-201ENST00000420575 175 ntBASIC3.45□□□□□ -1.86
CDX1P47902 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.45□□□□□ -1.86
CDX1P47902 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.45□□□□□ -1.86
CDX1P47902 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
CDX1P47902 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.45□□□□□ -1.86
CDX1P47902 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.45□□□□□ -1.86
CDX1P47902 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.45□□□□□ -1.86
CDX1P47902 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.45□□□□□ -1.86
CDX1P47902 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.45□□□□□ -1.86
CDX1P47902 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.45□□□□□ -1.86
CDX1P47902 BX322784.1-201ENST00000455793 1077 ntBASIC3.45□□□□□ -1.86
CDX1P47902 AL136097.1-201ENST00000456945 913 ntBASIC3.45□□□□□ -1.86
CDX1P47902 snoU13.4-201ENST00000458916 104 ntBASIC3.45□□□□□ -1.86
CDX1P47902 AC116533.1-201ENST00000459748 321 ntBASIC3.45□□□□□ -1.86
CDX1P47902 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.45□□□□□ -1.86
CDX1P47902 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.45□□□□□ -1.86
CDX1P47902 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CDX1P47902 RNU6-1095P-201ENST00000516148 108 ntBASIC3.45□□□□□ -1.86
CDX1P47902 MRPS36P3-201ENST00000519284 130 ntBASIC3.45□□□□□ -1.86
CDX1P47902 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.45□□□□□ -1.86
CDX1P47902 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.45□□□□□ -1.86
CDX1P47902 AC239860.2-201ENST00000525886 270 ntBASIC3.45□□□□□ -1.86
CDX1P47902 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.45□□□□□ -1.86
CDX1P47902 SETP7-201ENST00000552169 453 ntBASIC3.45□□□□□ -1.86
CDX1P47902 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.45□□□□□ -1.86
CDX1P47902 PARP1P2-201ENST00000556806 195 ntBASIC3.45□□□□□ -1.86
CDX1P47902 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.45□□□□□ -1.86
CDX1P47902 MIR4697-201ENST00000582977 78 ntBASIC3.45□□□□□ -1.86
CDX1P47902 AC006023.2-201ENST00000609916 167 ntBASIC3.45□□□□□ -1.86
CDX1P47902 AC087683.2-201ENST00000611384 326 ntBASIC3.45□□□□□ -1.86
CDX1P47902 AL136981.2-201ENST00000617319 734 ntBASIC3.45□□□□□ -1.86
CDX1P47902 AL357080.1-201ENST00000617394 239 ntBASIC3.45□□□□□ -1.86
CDX1P47902 uc_338.13-201ENST00000618243 179 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms