Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC008155.2-201ENST00000464337 397 ntBASIC3.28□□□□□ -1.88
SHMT2P34897 NAMPTP2-201ENST00000505629 1115 ntBASIC3.28□□□□□ -1.88
SHMT2P34897 HIGD1AP3-201ENST00000515857 278 ntBASIC3.28□□□□□ -1.88
SHMT2P34897 AC104027.1-201ENST00000521887 300 ntBASIC3.28□□□□□ -1.88
SHMT2P34897 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.28□□□□□ -1.88
SHMT2P34897 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.28□□□□□ -1.88
SHMT2P34897 AC004024.1-201ENST00000549244 247 ntBASIC3.28□□□□□ -1.88
SHMT2P34897 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.28□□□□□ -1.88
SHMT2P34897 AC074050.1-201ENST00000563247 211 ntBASIC3.28□□□□□ -1.88
SHMT2P34897 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.28□□□□□ -1.88
SHMT2P34897 MTCYBP28-201ENST00000566728 1132 ntBASIC3.28□□□□□ -1.88
SHMT2P34897 MIR4276-201ENST00000584832 70 ntBASIC3.28□□□□□ -1.88
SHMT2P34897 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.28□□□□□ -1.88
SHMT2P34897 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.28□□□□□ -1.88
SHMT2P34897 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.28□□□□□ -1.88
SHMT2P34897 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.28□□□□□ -1.88
SHMT2P34897 AL020997.3-201ENST00000602843 359 ntBASIC3.28□□□□□ -1.88
SHMT2P34897 AC016542.1-201ENST00000608259 493 ntBASIC3.28□□□□□ -1.88
SHMT2P34897 AC018816.2-201ENST00000621460 353 ntBASIC3.28□□□□□ -1.88
SHMT2P34897 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.28□□□□□ -1.88
SHMT2P34897 AC004777.1-201ENST00000624317 287 ntBASIC3.28□□□□□ -1.88
SHMT2P34897 AC048347.1-201ENST00000624621 427 ntBASIC3.28□□□□□ -1.88
SHMT2P34897 AL121594.5-201ENST00000631724 573 ntBASIC3.28□□□□□ -1.88
SHMT2P34897 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.28□□□□□ -1.88
SHMT2P34897 AC093908.1-201ENST00000623125 8092 ntBASIC3.28□□□□□ -1.88
SHMT2P34897 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.28□□□□□ -1.89
SHMT2P34897 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHMT2P34897 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.27□□□□□ -1.89
SHMT2P34897 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SHMT2P34897 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SHMT2P34897 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHMT2P34897 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHMT2P34897 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SHMT2P34897 RNA5SP197-201ENST00000363357 119 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 RNU6-353P-201ENST00000364266 108 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 RNU6-805P-201ENST00000365643 106 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHMT2P34897 U6.112-201ENST00000384129 70 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 AC126124.2-201ENST00000413542 321 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 AC008280.1-201ENST00000418851 412 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 AL513174.1-201ENST00000423182 629 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 AC010881.1-201ENST00000433830 235 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.27□□□□□ -1.89
SHMT2P34897 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.27□□□□□ -1.89
SHMT2P34897 AC002542.1-201ENST00000440683 193 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.27□□□□□ -1.89
SHMT2P34897 SEPT14P24-201ENST00000447236 180 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 RPL29P29-201ENST00000448725 423 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 HMGN1P18-201ENST00000457642 277 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.27□□□□□ -1.89
SHMT2P34897 AC005921.1-201ENST00000510589 286 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.27□□□□□ -1.89
SHMT2P34897 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.27□□□□□ -1.89
SHMT2P34897 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.27□□□□□ -1.89
SHMT2P34897 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.27□□□□□ -1.89
SHMT2P34897 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SHMT2P34897 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.27□□□□□ -1.89
SHMT2P34897 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.27□□□□□ -1.89
SHMT2P34897 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.27□□□□□ -1.89
SHMT2P34897 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.27□□□□□ -1.89
SHMT2P34897 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.27□□□□□ -1.89
SHMT2P34897 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.27□□□□□ -1.89
SHMT2P34897 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.27□□□□□ -1.89
SHMT2P34897 AC067852.3-201ENST00000589177 561 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 SRGNP1-201ENST00000603392 451 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 AC013468.1-201ENST00000608680 598 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 AC008759.3-201ENST00000613300 508 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.27□□□□□ -1.89
SHMT2P34897 AC006249.1-201ENST00000621223 471 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 AP000943.4-201ENST00000622912 357 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 AP000720.1-201ENST00000625091 483 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 AC127502.3-201ENST00000636170 1206 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
SHMT2P34897 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.27□□□□□ -1.89
SHMT2P34897 Z83843.1-201ENST00000604070 3685 ntBASIC3.27□□□□□ -1.89
SHMT2P34897 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SHMT2P34897 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
SHMT2P34897 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHMT2P34897 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.26□□□□□ -1.89
SHMT2P34897 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
SHMT2P34897 MTND5P28-201ENST00000438005 1594 ntBASIC3.26□□□□□ -1.89
SHMT2P34897 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.26□□□□□ -1.89
SHMT2P34897 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.26□□□□□ -1.89
SHMT2P34897 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SHMT2P34897 SNORA31-201ENST00000362607 130 ntBASIC3.26□□□□□ -1.89
SHMT2P34897 RNU6-1243P-201ENST00000364028 107 ntBASIC3.26□□□□□ -1.89
SHMT2P34897 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SHMT2P34897 TAF9BP1-201ENST00000396646 746 ntBASIC3.26□□□□□ -1.89
SHMT2P34897 BX323014.1-201ENST00000412876 237 ntBASIC3.26□□□□□ -1.89
SHMT2P34897 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SHMT2P34897 OR51A3P-201ENST00000413596 924 ntBASIC3.26□□□□□ -1.89
SHMT2P34897 TAF13P2-201ENST00000416876 286 ntBASIC3.26□□□□□ -1.89
SHMT2P34897 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.26□□□□□ -1.89
SHMT2P34897 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.26□□□□□ -1.89
SHMT2P34897 OR51AB1P-201ENST00000429046 620 ntBASIC3.26□□□□□ -1.89
SHMT2P34897 RPS7P2-201ENST00000435134 607 ntBASIC3.26□□□□□ -1.89
SHMT2P34897 RPL23AP22-201ENST00000437556 453 ntBASIC3.26□□□□□ -1.89
SHMT2P34897 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
SHMT2P34897 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms