Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HOXA11P31270 NUP35P2-201ENST00000416748 943 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXA11P31270 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXA11P31270 RPL37P1-201ENST00000432310 284 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXA11P31270 ATP5F1P1-201ENST00000433775 569 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 RPS26P40-201ENST00000435209 294 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 HMGB1P45-201ENST00000435986 653 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXA11P31270 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXA11P31270 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXA11P31270 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXA11P31270 AC073522.1-201ENST00000483312 377 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 AL139099.1-201ENST00000497398 403 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC4.3□□□□□ -1.72
HOXA11P31270 AC147055.4-201ENST00000504399 745 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXA11P31270 SNX5P1-201ENST00000505757 1041 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXA11P31270 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.3□□□□□ -1.72
HOXA11P31270 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.3□□□□□ -1.72
HOXA11P31270 AC010587.2-201ENST00000511727 448 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 AC109445.1-201ENST00000512356 383 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 AC093853.1-201ENST00000515689 483 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 SCARNA14-201ENST00000516903 136 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXA11P31270 OR4C2P-201ENST00000530855 1064 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.3□□□□□ -1.72
HOXA11P31270 AC005832.3-201ENST00000537929 631 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.3□□□□□ -1.72
HOXA11P31270 CYCSP30-201ENST00000546447 172 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 HIGD1AP17-201ENST00000554576 276 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 AC007424.1-203ENST00000554613 687 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 AL121834.1-201ENST00000572284 509 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 AC011260.1-201ENST00000578420 472 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 AF131215.7-201ENST00000602443 707 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 AC107304.1-201ENST00000604229 296 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 RNA5SP108-201ENST00000605921 117 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 AP000254.1-201ENST00000609934 520 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 AL121772.2-201ENST00000614331 297 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXA11P31270 AC009509.4-201ENST00000619202 509 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 AL590240.3-201ENST00000621416 943 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 MIR4496-201ENST00000635896 61 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.3□□□□□ -1.72
HOXA11P31270 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXA11P31270 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
HOXA11P31270 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HOXA11P31270 Z82217.1-201ENST00000625157 8149 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
HOXA11P31270 ZNF833P-201ENST00000424938 1494 ntBASIC4.3□□□□□ -1.72
HOXA11P31270 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
HOXA11P31270 AC087359.1-201ENST00000508335 1740 ntBASIC4.29□□□□□ -1.72
HOXA11P31270 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXA11P31270 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXA11P31270 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXA11P31270 DCAF13P1-201ENST00000495256 1330 ntBASIC4.29□□□□□ -1.72
HOXA11P31270 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXA11P31270 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.29□□□□□ -1.72
HOXA11P31270 RNU6-619P-201ENST00000365146 108 ntBASIC4.29□□□□□ -1.72
HOXA11P31270 AL359837.1-201ENST00000381357 287 ntBASIC4.29□□□□□ -1.72
HOXA11P31270 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.29□□□□□ -1.72
HOXA11P31270 SNORA3C-201ENST00000408792 125 ntBASIC4.29□□□□□ -1.72
HOXA11P31270 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.29□□□□□ -1.72
HOXA11P31270 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXA11P31270 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXA11P31270 Z99497.1-201ENST00000421282 135 ntBASIC4.29□□□□□ -1.72
HOXA11P31270 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.29□□□□□ -1.72
HOXA11P31270 AL389915.1-201ENST00000422463 466 ntBASIC4.29□□□□□ -1.72
HOXA11P31270 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXA11P31270 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXA11P31270 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC4.29□□□□□ -1.72
HOXA11P31270 AL591503.2-201ENST00000442314 1005 ntBASIC4.29□□□□□ -1.72
HOXA11P31270 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC4.29□□□□□ -1.72
HOXA11P31270 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXA11P31270 HMGB3P30-201ENST00000457863 606 ntBASIC4.29□□□□□ -1.72
HOXA11P31270 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXA11P31270 RNU6-416P-201ENST00000516265 103 ntBASIC4.29□□□□□ -1.72
HOXA11P31270 RNU6-720P-201ENST00000516363 108 ntBASIC4.29□□□□□ -1.72
HOXA11P31270 Vault.1-201ENST00000516474 102 ntBASIC4.29□□□□□ -1.72
HOXA11P31270 IGKV2-38-201ENST00000517443 247 ntBASIC4.29□□□□□ -1.72
HOXA11P31270 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.29□□□□□ -1.72
HOXA11P31270 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXA11P31270 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
HOXA11P31270 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXA11P31270 IGJP1-201ENST00000522682 475 ntBASIC4.29□□□□□ -1.72
HOXA11P31270 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.29□□□□□ -1.72
HOXA11P31270 AP002963.1-201ENST00000530590 184 ntBASIC4.29□□□□□ -1.72
HOXA11P31270 AC022880.1-201ENST00000534017 973 ntBASIC4.29□□□□□ -1.72
HOXA11P31270 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC4.29□□□□□ -1.72
HOXA11P31270 AL121766.1-201ENST00000547436 487 ntBASIC4.29□□□□□ -1.72
HOXA11P31270 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXA11P31270 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXA11P31270 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXA11P31270 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC4.29□□□□□ -1.72
HOXA11P31270 MTND6P33-201ENST00000571794 183 ntBASIC4.29□□□□□ -1.72
HOXA11P31270 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.29□□□□□ -1.72
HOXA11P31270 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.29□□□□□ -1.72
HOXA11P31270 WISP1-OT1-201ENST00000602893 642 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 104 ms