Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.82□□□□□ -1.64
PTX3P26022 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTX3P26022 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.82□□□□□ -1.64
PTX3P26022 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.82□□□□□ -1.64
PTX3P26022 CASC19-280ENST00000642102 1351 ntBASIC4.82□□□□□ -1.64
PTX3P26022 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTX3P26022 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.82□□□□□ -1.64
PTX3P26022 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTX3P26022 OR5J1P-201ENST00000313544 939 ntBASIC4.82□□□□□ -1.64
PTX3P26022 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTX3P26022 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PTX3P26022 RNU6-797P-201ENST00000363101 109 ntBASIC4.82□□□□□ -1.64
PTX3P26022 Y_RNA.159-201ENST00000363674 87 ntBASIC4.82□□□□□ -1.64
PTX3P26022 RNU1-39P-201ENST00000383897 165 ntBASIC4.82□□□□□ -1.64
PTX3P26022 U3.29-201ENST00000391296 212 ntBASIC4.82□□□□□ -1.64
PTX3P26022 U3.36-201ENST00000408418 213 ntBASIC4.82□□□□□ -1.64
PTX3P26022 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.82□□□□□ -1.64
PTX3P26022 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.82□□□□□ -1.64
PTX3P26022 AMD1P2-201ENST00000412936 992 ntBASIC4.82□□□□□ -1.64
PTX3P26022 AC009237.5-201ENST00000414271 501 ntBASIC4.82□□□□□ -1.64
PTX3P26022 MTATP6P18-201ENST00000417994 673 ntBASIC4.82□□□□□ -1.64
PTX3P26022 ZNF90P2-204ENST00000419323 1075 ntBASIC4.82□□□□□ -1.64
PTX3P26022 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTX3P26022 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTX3P26022 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC4.82□□□□□ -1.64
PTX3P26022 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC4.82□□□□□ -1.64
PTX3P26022 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.82□□□□□ -1.64
PTX3P26022 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTX3P26022 HMGB3P12-201ENST00000438745 556 ntBASIC4.82□□□□□ -1.64
PTX3P26022 AL450023.3-201ENST00000440592 271 ntBASIC4.82□□□□□ -1.64
PTX3P26022 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.82□□□□□ -1.64
PTX3P26022 MTND1P9-201ENST00000453775 944 ntBASIC4.82□□□□□ -1.64
PTX3P26022 AC104308.1-201ENST00000454621 333 ntBASIC4.82□□□□□ -1.64
PTX3P26022 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.82□□□□□ -1.64
PTX3P26022 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PTX3P26022 RPS29P25-201ENST00000481709 171 ntBASIC4.82□□□□□ -1.64
PTX3P26022 COX7A2P2-201ENST00000505291 250 ntBASIC4.82□□□□□ -1.64
PTX3P26022 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.82□□□□□ -1.64
PTX3P26022 AC114781.4-201ENST00000513707 639 ntBASIC4.82□□□□□ -1.64
PTX3P26022 RNU6-1281P-201ENST00000516223 105 ntBASIC4.82□□□□□ -1.64
PTX3P26022 RNA5SP464-201ENST00000516251 108 ntBASIC4.82□□□□□ -1.64
PTX3P26022 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC4.82□□□□□ -1.64
PTX3P26022 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTX3P26022 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.82□□□□□ -1.64
PTX3P26022 AP003497.1-201ENST00000528472 562 ntBASIC4.82□□□□□ -1.64
PTX3P26022 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PTX3P26022 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.82□□□□□ -1.64
PTX3P26022 UBE2L4-201ENST00000587688 464 ntBASIC4.82□□□□□ -1.64
PTX3P26022 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.82□□□□□ -1.64
PTX3P26022 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.82□□□□□ -1.64
PTX3P26022 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.82□□□□□ -1.64
PTX3P26022 AL162413.1-201ENST00000603198 110 ntBASIC4.82□□□□□ -1.64
PTX3P26022 AL049634.3-201ENST00000604968 457 ntBASIC4.82□□□□□ -1.64
PTX3P26022 AC010424.2-201ENST00000607594 443 ntBASIC4.82□□□□□ -1.64
PTX3P26022 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.82□□□□□ -1.64
PTX3P26022 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.82□□□□□ -1.64
PTX3P26022 AC022106.2-201ENST00000620114 757 ntBASIC4.82□□□□□ -1.64
PTX3P26022 AL158801.5-201ENST00000623123 465 ntBASIC4.82□□□□□ -1.64
PTX3P26022 AC009161.2-201ENST00000624626 138 ntBASIC4.82□□□□□ -1.64
PTX3P26022 MIR4496-201ENST00000635896 61 ntBASIC4.82□□□□□ -1.64
PTX3P26022 AC099654.5-201ENST00000636479 350 ntBASIC4.82□□□□□ -1.64
PTX3P26022 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTX3P26022 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC4.82□□□□□ -1.64
PTX3P26022 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.82□□□□□ -1.64
PTX3P26022 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
PTX3P26022 AP001273.1-201ENST00000624493 3152 ntBASIC4.82□□□□□ -1.64
PTX3P26022 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.82□□□□□ -1.64
PTX3P26022 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTX3P26022 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTX3P26022 AC073544.1-201ENST00000600110 1595 ntBASIC4.82□□□□□ -1.64
PTX3P26022 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
PTX3P26022 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.82□□□□□ -1.64
PTX3P26022 THAP12P4-201ENST00000528321 2266 ntBASIC4.81□□□□□ -1.64
PTX3P26022 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
PTX3P26022 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.81□□□□□ -1.64
PTX3P26022 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PTX3P26022 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.81□□□□□ -1.64
PTX3P26022 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.81□□□□□ -1.64
PTX3P26022 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PTX3P26022 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PTX3P26022 RNU6-108P-201ENST00000365558 107 ntBASIC4.81□□□□□ -1.64
PTX3P26022 MT-TL1-201ENST00000386347 75 ntBASIC4.81□□□□□ -1.64
PTX3P26022 SNORA77-201ENST00000408716 125 ntBASIC4.81□□□□□ -1.64
PTX3P26022 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
PTX3P26022 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.81□□□□□ -1.64
PTX3P26022 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.81□□□□□ -1.64
PTX3P26022 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.81□□□□□ -1.64
PTX3P26022 AC006548.1-201ENST00000427470 102 ntBASIC4.81□□□□□ -1.64
PTX3P26022 BX323845.1-201ENST00000432417 179 ntBASIC4.81□□□□□ -1.64
PTX3P26022 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.81□□□□□ -1.64
PTX3P26022 RPS29P9-201ENST00000440360 171 ntBASIC4.81□□□□□ -1.64
PTX3P26022 AC093156.1-201ENST00000440382 670 ntBASIC4.81□□□□□ -1.64
PTX3P26022 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC4.81□□□□□ -1.64
PTX3P26022 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.81□□□□□ -1.64
PTX3P26022 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.81□□□□□ -1.64
PTX3P26022 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.81□□□□□ -1.64
PTX3P26022 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.81□□□□□ -1.64
PTX3P26022 AC010733.1-201ENST00000451515 401 ntBASIC4.81□□□□□ -1.64
PTX3P26022 RPS20P24-201ENST00000457473 361 ntBASIC4.81□□□□□ -1.64
PTX3P26022 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 111.1 ms