Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC078785.3-201ENST00000476607 425 ntBASIC4.58□□□□□ -1.68
CD40P25942 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.58□□□□□ -1.68
CD40P25942 AC093815.1-201ENST00000508637 280 ntBASIC4.58□□□□□ -1.68
CD40P25942 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.58□□□□□ -1.68
CD40P25942 LRRC34P2-201ENST00000514850 553 ntBASIC4.58□□□□□ -1.68
CD40P25942 RNU2-10P-201ENST00000516375 211 ntBASIC4.58□□□□□ -1.68
CD40P25942 RNU7-51P-201ENST00000516560 62 ntBASIC4.58□□□□□ -1.68
CD40P25942 HMGB1P41-201ENST00000520234 440 ntBASIC4.58□□□□□ -1.68
CD40P25942 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.58□□□□□ -1.68
CD40P25942 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC4.58□□□□□ -1.68
CD40P25942 DEFB108D-201ENST00000527787 222 ntBASIC4.58□□□□□ -1.68
CD40P25942 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CD40P25942 AC128657.1-201ENST00000549459 145 ntBASIC4.58□□□□□ -1.68
CD40P25942 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.58□□□□□ -1.68
CD40P25942 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.58□□□□□ -1.68
CD40P25942 FGF7P1-201ENST00000582820 288 ntBASIC4.58□□□□□ -1.68
CD40P25942 AC012669.1-201ENST00000603209 283 ntBASIC4.58□□□□□ -1.68
CD40P25942 AC006254.3-201ENST00000603353 884 ntBASIC4.58□□□□□ -1.68
CD40P25942 LLPHP1-201ENST00000603571 367 ntBASIC4.58□□□□□ -1.68
CD40P25942 AC010680.4-201ENST00000605334 543 ntBASIC4.58□□□□□ -1.68
CD40P25942 AC019193.2-201ENST00000610012 634 ntBASIC4.58□□□□□ -1.68
CD40P25942 DISC2.1-201ENST00000612827 205 ntBASIC4.58□□□□□ -1.68
CD40P25942 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.58□□□□□ -1.68
CD40P25942 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.58□□□□□ -1.68
CD40P25942 AC006504.8-201ENST00000621046 635 ntBASIC4.58□□□□□ -1.68
CD40P25942 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.58□□□□□ -1.68
CD40P25942 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CD40P25942 AL139811.1-201ENST00000424779 2299 ntBASIC4.58□□□□□ -1.68
CD40P25942 AC093849.1-201ENST00000563631 2209 ntBASIC4.58□□□□□ -1.68
CD40P25942 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.58□□□□□ -1.68
CD40P25942 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CD40P25942 AC114947.2-201ENST00000565748 2125 ntBASIC4.58□□□□□ -1.68
CD40P25942 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CD40P25942 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.58□□□□□ -1.68
CD40P25942 AC092747.4-201ENST00000620519 1861 ntBASIC4.58□□□□□ -1.68
CD40P25942 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.58□□□□□ -1.68
CD40P25942 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CD40P25942 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CD40P25942 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CD40P25942 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
CD40P25942 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CD40P25942 SOCS5P3-201ENST00000425115 1576 ntBASIC4.57□□□□□ -1.68
CD40P25942 ABCC13-202ENST00000463099 3842 ntBASIC4.57□□□□□ -1.68
CD40P25942 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
CD40P25942 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CD40P25942 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC4.57□□□□□ -1.68
CD40P25942 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CD40P25942 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CD40P25942 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CD40P25942 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CD40P25942 RNU6-1249P-201ENST00000363237 111 ntBASIC4.57□□□□□ -1.68
CD40P25942 SNORA58B-201ENST00000364259 136 ntBASIC4.57□□□□□ -1.68
CD40P25942 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CD40P25942 RNU6-641P-201ENST00000384006 107 ntBASIC4.57□□□□□ -1.68
CD40P25942 MIR600-201ENST00000385007 98 ntBASIC4.57□□□□□ -1.68
CD40P25942 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CD40P25942 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
CD40P25942 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
CD40P25942 AL354719.1-201ENST00000406535 843 ntBASIC4.57□□□□□ -1.68
CD40P25942 RN7SKP159-201ENST00000410657 292 ntBASIC4.57□□□□□ -1.68
CD40P25942 RNA5SP107-201ENST00000411358 122 ntBASIC4.57□□□□□ -1.68
CD40P25942 AL513185.2-201ENST00000425543 193 ntBASIC4.57□□□□□ -1.68
CD40P25942 ATP5JP1-201ENST00000431631 322 ntBASIC4.57□□□□□ -1.68
CD40P25942 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.57□□□□□ -1.68
CD40P25942 AC005094.1-201ENST00000440420 368 ntBASIC4.57□□□□□ -1.68
CD40P25942 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.57□□□□□ -1.68
CD40P25942 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.57□□□□□ -1.68
CD40P25942 AL356010.1-201ENST00000456364 102 ntBASIC4.57□□□□□ -1.68
CD40P25942 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.57□□□□□ -1.68
CD40P25942 RN7SL329P-201ENST00000467740 299 ntBASIC4.57□□□□□ -1.68
CD40P25942 RPL7AP6-201ENST00000477943 801 ntBASIC4.57□□□□□ -1.68
CD40P25942 AC004453.1-201ENST00000487895 408 ntBASIC4.57□□□□□ -1.68
CD40P25942 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
CD40P25942 HMGN1P12-201ENST00000499125 195 ntBASIC4.57□□□□□ -1.68
CD40P25942 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.57□□□□□ -1.68
CD40P25942 MTCO2P30-201ENST00000503662 364 ntBASIC4.57□□□□□ -1.68
CD40P25942 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.57□□□□□ -1.68
CD40P25942 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.57□□□□□ -1.68
CD40P25942 AC008694.2-201ENST00000517591 306 ntBASIC4.57□□□□□ -1.68
CD40P25942 AC108449.1-202ENST00000517632 478 ntTSL 3 BASIC4.57□□□□□ -1.68
CD40P25942 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.57□□□□□ -1.68
CD40P25942 AC012400.1-201ENST00000518452 381 ntBASIC4.57□□□□□ -1.68
CD40P25942 AC136777.2-201ENST00000522979 358 ntBASIC4.57□□□□□ -1.68
CD40P25942 FAM60DP-201ENST00000524174 632 ntBASIC4.57□□□□□ -1.68
CD40P25942 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.57□□□□□ -1.68
CD40P25942 ARL2BPP2-201ENST00000550907 489 ntBASIC4.57□□□□□ -1.68
CD40P25942 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.57□□□□□ -1.68
CD40P25942 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC4.57□□□□□ -1.68
CD40P25942 HNRNPCP4-201ENST00000571636 900 ntBASIC4.57□□□□□ -1.68
CD40P25942 AC015917.1-201ENST00000579654 510 ntBASIC4.57□□□□□ -1.68
CD40P25942 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.57□□□□□ -1.68
CD40P25942 AC006116.3-201ENST00000592968 361 ntBASIC4.57□□□□□ -1.68
CD40P25942 AC087763.1-201ENST00000603391 286 ntBASIC4.57□□□□□ -1.68
CD40P25942 AC009597.2-201ENST00000604659 592 ntBASIC4.57□□□□□ -1.68
CD40P25942 AL162431.4-201ENST00000604674 411 ntBASIC4.57□□□□□ -1.68
CD40P25942 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC4.57□□□□□ -1.68
CD40P25942 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC4.57□□□□□ -1.68
CD40P25942 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.57□□□□□ -1.68
CD40P25942 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.57□□□□□ -1.68
CD40P25942 AC006020.1-201ENST00000420179 1854 ntBASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms