Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC005345.1-201ENST00000431868 217 ntBASIC3.83□□□□□ -1.8
CDH3P22223 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
CDH3P22223 CDC27P1-201ENST00000445384 715 ntBASIC3.83□□□□□ -1.8
CDH3P22223 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.83□□□□□ -1.8
CDH3P22223 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH3P22223 AL359073.1-201ENST00000448036 403 ntBASIC3.83□□□□□ -1.8
CDH3P22223 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH3P22223 NECAP1P2-201ENST00000455668 727 ntBASIC3.83□□□□□ -1.8
CDH3P22223 RPL5P24-201ENST00000463742 885 ntBASIC3.83□□□□□ -1.8
CDH3P22223 GAPDHP36-201ENST00000480688 918 ntBASIC3.83□□□□□ -1.8
CDH3P22223 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH3P22223 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH3P22223 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH3P22223 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDH3P22223 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH3P22223 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.83□□□□□ -1.8
CDH3P22223 MTND2P26-201ENST00000528255 1029 ntBASIC3.83□□□□□ -1.8
CDH3P22223 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.83□□□□□ -1.8
CDH3P22223 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH3P22223 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH3P22223 AC090888.2-201ENST00000559765 1144 ntBASIC3.83□□□□□ -1.8
CDH3P22223 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH3P22223 AC090425.2-201ENST00000608818 501 ntBASIC3.83□□□□□ -1.8
CDH3P22223 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
CDH3P22223 AC021755.4-201ENST00000616620 456 ntBASIC3.83□□□□□ -1.8
CDH3P22223 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH3P22223 AP002782.1-201ENST00000623107 614 ntBASIC3.83□□□□□ -1.8
CDH3P22223 AC098679.5-201ENST00000624394 571 ntBASIC3.83□□□□□ -1.8
CDH3P22223 AC026634.1-201ENST00000634369 198 ntBASIC3.83□□□□□ -1.8
CDH3P22223 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDH3P22223 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH3P22223 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDH3P22223 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH3P22223 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.83□□□□□ -1.8
CDH3P22223 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH3P22223 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
CDH3P22223 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
CDH3P22223 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH3P22223 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.83□□□□□ -1.8
CDH3P22223 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH3P22223 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
CDH3P22223 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
CDH3P22223 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDH3P22223 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH3P22223 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH3P22223 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH3P22223 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH3P22223 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CDH3P22223 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH3P22223 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDH3P22223 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH3P22223 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH3P22223 RNU6-492P-201ENST00000363035 104 ntBASIC3.82□□□□□ -1.8
CDH3P22223 SNORA7.2-201ENST00000364446 145 ntBASIC3.82□□□□□ -1.8
CDH3P22223 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDH3P22223 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
CDH3P22223 HMGN2P8-201ENST00000391458 268 ntBASIC3.82□□□□□ -1.8
CDH3P22223 RNU2-42P-201ENST00000410697 113 ntBASIC3.82□□□□□ -1.8
CDH3P22223 AC007390.1-201ENST00000415722 356 ntBASIC3.82□□□□□ -1.8
CDH3P22223 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH3P22223 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH3P22223 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH3P22223 AC092447.3-201ENST00000426027 686 ntBASIC3.82□□□□□ -1.8
CDH3P22223 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDH3P22223 OR4F13P-201ENST00000428478 931 ntBASIC3.82□□□□□ -1.8
CDH3P22223 UBE2V1P1-201ENST00000430836 445 ntBASIC3.82□□□□□ -1.8
CDH3P22223 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH3P22223 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH3P22223 B3GNT2P1-201ENST00000434960 952 ntBASIC3.82□□□□□ -1.8
CDH3P22223 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH3P22223 MTCO2P20-201ENST00000437339 673 ntBASIC3.82□□□□□ -1.8
CDH3P22223 AL034418.1-201ENST00000448675 860 ntBASIC3.82□□□□□ -1.8
CDH3P22223 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH3P22223 HMGN3P1-201ENST00000453847 193 ntBASIC3.82□□□□□ -1.8
CDH3P22223 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH3P22223 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.82□□□□□ -1.8
CDH3P22223 AC010307.1-201ENST00000467206 836 ntBASIC3.82□□□□□ -1.8
CDH3P22223 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
CDH3P22223 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
CDH3P22223 AL049830.2-201ENST00000480072 201 ntBASIC3.82□□□□□ -1.8
CDH3P22223 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH3P22223 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH3P22223 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.82□□□□□ -1.8
CDH3P22223 RN7SKP277-201ENST00000516895 283 ntBASIC3.82□□□□□ -1.8
CDH3P22223 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.82□□□□□ -1.8
CDH3P22223 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH3P22223 AC005832.3-201ENST00000537929 631 ntBASIC3.82□□□□□ -1.8
CDH3P22223 AC138915.2-201ENST00000569776 97 ntBASIC3.82□□□□□ -1.8
CDH3P22223 AC074051.3-201ENST00000570238 358 ntBASIC3.82□□□□□ -1.8
CDH3P22223 MIR5685-201ENST00000579080 79 ntBASIC3.82□□□□□ -1.8
CDH3P22223 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.82□□□□□ -1.8
CDH3P22223 AC090616.5-202ENST00000582111 297 ntBASIC3.82□□□□□ -1.8
CDH3P22223 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH3P22223 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.82□□□□□ -1.8
CDH3P22223 BNIP3P26-201ENST00000600827 554 ntBASIC3.82□□□□□ -1.8
CDH3P22223 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.82□□□□□ -1.8
CDH3P22223 AC080013.3-201ENST00000606839 578 ntBASIC3.82□□□□□ -1.8
CDH3P22223 AL591424.2-201ENST00000617023 128 ntBASIC3.82□□□□□ -1.8
CDH3P22223 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.82□□□□□ -1.8
CDH3P22223 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms