Protein–RNA interactions for Protein: P16070

CD44, CD44 antigen, humanhuman

Known RBP Predictions only

Length 742 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD44P16070 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CD44P16070 AL591848.4-201ENST00000567832 3472 ntBASIC7.53□□□□□ -1.2
CD44P16070 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
CD44P16070 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
CD44P16070 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.53□□□□□ -1.2
CD44P16070 AC011592.1-201ENST00000624647 3634 ntBASIC7.53□□□□□ -1.2
CD44P16070 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.53□□□□□ -1.2
CD44P16070 TNPO1P2-201ENST00000426249 2665 ntBASIC7.53□□□□□ -1.2
CD44P16070 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
CD44P16070 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
CD44P16070 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
CD44P16070 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.2
CD44P16070 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CD44P16070 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.52□□□□□ -1.21
CD44P16070 AC005618.1-201ENST00000606901 3148 ntBASIC7.52□□□□□ -1.21
CD44P16070 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.52□□□□□ -1.21
CD44P16070 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CD44P16070 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.52□□□□□ -1.21
CD44P16070 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
CD44P16070 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CD44P16070 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
CD44P16070 AC007685.1-201ENST00000329806 452 ntBASIC7.52□□□□□ -1.21
CD44P16070 RNU6-222P-201ENST00000362438 107 ntBASIC7.52□□□□□ -1.21
CD44P16070 RNU6-235P-201ENST00000362644 107 ntBASIC7.52□□□□□ -1.21
CD44P16070 RNU6-578P-201ENST00000390980 103 ntBASIC7.52□□□□□ -1.21
CD44P16070 MIR1231-201ENST00000408101 92 ntBASIC7.52□□□□□ -1.21
CD44P16070 RNU6-1025P-201ENST00000410629 104 ntBASIC7.52□□□□□ -1.21
CD44P16070 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC7.52□□□□□ -1.21
CD44P16070 RPL7AP25-201ENST00000423357 805 ntBASIC7.52□□□□□ -1.21
CD44P16070 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7.52□□□□□ -1.21
CD44P16070 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.52□□□□□ -1.21
CD44P16070 GAPDHP20-201ENST00000444107 1007 ntBASIC7.52□□□□□ -1.21
CD44P16070 RPS7P4-201ENST00000444127 582 ntBASIC7.52□□□□□ -1.21
CD44P16070 AC016700.2-201ENST00000446011 156 ntBASIC7.52□□□□□ -1.21
CD44P16070 RPL23AP28-201ENST00000448062 470 ntBASIC7.52□□□□□ -1.21
CD44P16070 AC112187.1-201ENST00000455837 479 ntBASIC7.52□□□□□ -1.21
CD44P16070 RPL26P26-201ENST00000480251 434 ntBASIC7.52□□□□□ -1.21
CD44P16070 RN7SL382P-201ENST00000482631 282 ntBASIC7.52□□□□□ -1.21
CD44P16070 RPL23AP80-201ENST00000495605 424 ntBASIC7.52□□□□□ -1.21
CD44P16070 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC7.52□□□□□ -1.21
CD44P16070 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC7.52□□□□□ -1.21
CD44P16070 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC7.52□□□□□ -1.21
CD44P16070 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC7.52□□□□□ -1.21
CD44P16070 EDDM3DP-201ENST00000554692 434 ntBASIC7.52□□□□□ -1.21
CD44P16070 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.52□□□□□ -1.21
CD44P16070 MIR3121-201ENST00000579680 77 ntBASIC7.52□□□□□ -1.21
CD44P16070 COX6CP16-201ENST00000603667 216 ntBASIC7.52□□□□□ -1.21
CD44P16070 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC7.52□□□□□ -1.21
CD44P16070 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CD44P16070 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
CD44P16070 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CD44P16070 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.52□□□□□ -1.21
CD44P16070 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CD44P16070 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CD44P16070 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
CD44P16070 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC7.52□□□□□ -1.21
CD44P16070 AC092593.1-201ENST00000515413 1815 ntBASIC7.52□□□□□ -1.21
CD44P16070 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC7.52□□□□□ -1.21
CD44P16070 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CD44P16070 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CD44P16070 AK9-203ENST00000368948 2478 ntTSL 5 BASIC7.52□□□□□ -1.21
CD44P16070 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CD44P16070 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC7.52□□□□□ -1.21
CD44P16070 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.52□□□□□ -1.21
CD44P16070 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
CD44P16070 SCAPER-203ENST00000538941 4853 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CD44P16070 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
CD44P16070 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
CD44P16070 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CD44P16070 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CD44P16070 SLC2A3P1-201ENST00000519666 1451 ntBASIC7.51□□□□□ -1.21
CD44P16070 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.51□□□□□ -1.21
CD44P16070 RNU6-1175P-201ENST00000365200 107 ntBASIC7.51□□□□□ -1.21
CD44P16070 Y_RNA.348-201ENST00000365403 103 ntBASIC7.51□□□□□ -1.21
CD44P16070 MIR578-201ENST00000384828 96 ntBASIC7.51□□□□□ -1.21
CD44P16070 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CD44P16070 SNORA11D-201ENST00000408548 128 ntBASIC7.51□□□□□ -1.21
CD44P16070 SNORA11E-201ENST00000408778 128 ntBASIC7.51□□□□□ -1.21
CD44P16070 RNA5SP280-201ENST00000411230 115 ntBASIC7.51□□□□□ -1.21
CD44P16070 AL034379.1-201ENST00000423216 253 ntBASIC7.51□□□□□ -1.21
CD44P16070 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.51□□□□□ -1.21
CD44P16070 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC7.51□□□□□ -1.21
CD44P16070 RN7SL776P-201ENST00000493390 268 ntBASIC7.51□□□□□ -1.21
CD44P16070 AC009120.1-201ENST00000493458 473 ntBASIC7.51□□□□□ -1.21
CD44P16070 COX7A2P2-201ENST00000505291 250 ntBASIC7.51□□□□□ -1.21
CD44P16070 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC7.51□□□□□ -1.21
CD44P16070 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC7.51□□□□□ -1.21
CD44P16070 RN7SKP60-201ENST00000516985 239 ntBASIC7.51□□□□□ -1.21
CD44P16070 snoMBII-202.2-201ENST00000517263 86 ntBASIC7.51□□□□□ -1.21
CD44P16070 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC7.51□□□□□ -1.21
CD44P16070 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.51□□□□□ -1.21
CD44P16070 MIR4428-201ENST00000584884 73 ntBASIC7.51□□□□□ -1.21
CD44P16070 AC067852.3-201ENST00000589177 561 ntBASIC7.51□□□□□ -1.21
CD44P16070 uc_338.28-201ENST00000612082 187 ntBASIC7.51□□□□□ -1.21
CD44P16070 SNX18P10-201ENST00000625014 519 ntBASIC7.51□□□□□ -1.21
CD44P16070 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CD44P16070 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.51□□□□□ -1.21
CD44P16070 IL31RA-203ENST00000359040 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CD44P16070 UG0898H09-202ENST00000623646 7040 ntBASIC7.51□□□□□ -1.21
CD44P16070 PANDAR-201ENST00000629595 1506 ntBASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms