Protein–RNA interactions for Protein: P14543

NID1, Nidogen-1, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NID1P14543 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.52□□□□□ -1.53
NID1P14543 AC005899.2-201ENST00000584353 90 ntBASIC5.52□□□□□ -1.53
NID1P14543 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.52□□□□□ -1.53
NID1P14543 uc_338.26-201ENST00000612659 160 ntBASIC5.52□□□□□ -1.53
NID1P14543 AC000123.2-201ENST00000623124 461 ntBASIC5.52□□□□□ -1.53
NID1P14543 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
NID1P14543 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NID1P14543 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
NID1P14543 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
NID1P14543 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NID1P14543 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.52□□□□□ -1.53
NID1P14543 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NID1P14543 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
NID1P14543 RBMY1HP-201ENST00000382759 1389 ntBASIC5.52□□□□□ -1.53
NID1P14543 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
NID1P14543 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NID1P14543 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NID1P14543 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.52□□□□□ -1.53
NID1P14543 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NID1P14543 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.52□□□□□ -1.53
NID1P14543 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NID1P14543 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
NID1P14543 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.52□□□□□ -1.53
NID1P14543 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
NID1P14543 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NID1P14543 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.51□□□□□ -1.53
NID1P14543 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NID1P14543 BDP1P-201ENST00000582658 1990 ntBASIC5.51□□□□□ -1.53
NID1P14543 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
NID1P14543 HSPA8P14-201ENST00000552265 1805 ntBASIC5.51□□□□□ -1.53
NID1P14543 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.51□□□□□ -1.53
NID1P14543 AL161756.3-201ENST00000641216 2071 ntBASIC5.51□□□□□ -1.53
NID1P14543 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
NID1P14543 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
NID1P14543 Y_RNA.2-201ENST00000362330 96 ntBASIC5.51□□□□□ -1.53
NID1P14543 Y_RNA.150-201ENST00000363562 102 ntBASIC5.51□□□□□ -1.53
NID1P14543 Y_RNA.270-201ENST00000364693 104 ntBASIC5.51□□□□□ -1.53
NID1P14543 RNA5SP510-201ENST00000364697 99 ntBASIC5.51□□□□□ -1.53
NID1P14543 RNU6-432P-201ENST00000384196 109 ntBASIC5.51□□□□□ -1.53
NID1P14543 AL136372.1-201ENST00000403060 228 ntBASIC5.51□□□□□ -1.53
NID1P14543 RN7SKP229-201ENST00000410465 302 ntBASIC5.51□□□□□ -1.53
NID1P14543 Z99755.1-201ENST00000414048 380 ntBASIC5.51□□□□□ -1.53
NID1P14543 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NID1P14543 MRPS18CP6-201ENST00000423587 223 ntBASIC5.51□□□□□ -1.53
NID1P14543 AL590632.1-201ENST00000424289 371 ntBASIC5.51□□□□□ -1.53
NID1P14543 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.51□□□□□ -1.53
NID1P14543 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.51□□□□□ -1.53
NID1P14543 CEACAMP9-201ENST00000442990 513 ntBASIC5.51□□□□□ -1.53
NID1P14543 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.51□□□□□ -1.53
NID1P14543 RAC1P7-201ENST00000445367 377 ntBASIC5.51□□□□□ -1.53
NID1P14543 RPS15AP27-201ENST00000449183 343 ntBASIC5.51□□□□□ -1.53
NID1P14543 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NID1P14543 AC104472.2-201ENST00000469035 601 ntBASIC5.51□□□□□ -1.53
NID1P14543 AC011005.2-201ENST00000487324 359 ntBASIC5.51□□□□□ -1.53
NID1P14543 AC016559.2-201ENST00000510759 359 ntBASIC5.51□□□□□ -1.53
NID1P14543 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.51□□□□□ -1.53
NID1P14543 RNU6-111P-201ENST00000517179 105 ntBASIC5.51□□□□□ -1.53
NID1P14543 CYCSP22-201ENST00000517555 339 ntBASIC5.51□□□□□ -1.53
NID1P14543 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC5.51□□□□□ -1.53
NID1P14543 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC5.51□□□□□ -1.53
NID1P14543 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.51□□□□□ -1.53
NID1P14543 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.51□□□□□ -1.53
NID1P14543 AC022080.3-201ENST00000544433 482 ntBASIC5.51□□□□□ -1.53
NID1P14543 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.51□□□□□ -1.53
NID1P14543 AC106782.4-201ENST00000568264 210 ntBASIC5.51□□□□□ -1.53
NID1P14543 MIR3941-201ENST00000582572 103 ntBASIC5.51□□□□□ -1.53
NID1P14543 AC006115.2-201ENST00000596823 202 ntBASIC5.51□□□□□ -1.53
NID1P14543 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.51□□□□□ -1.53
NID1P14543 AL021918.2-201ENST00000613415 194 ntBASIC5.51□□□□□ -1.53
NID1P14543 FAM27E2-201ENST00000619668 403 ntBASIC5.51□□□□□ -1.53
NID1P14543 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.51□□□□□ -1.53
NID1P14543 MTND5P6-201ENST00000422338 1798 ntBASIC5.51□□□□□ -1.53
NID1P14543 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
NID1P14543 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
NID1P14543 AL138713.1-201ENST00000624026 2130 ntBASIC5.51□□□□□ -1.53
NID1P14543 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NID1P14543 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NID1P14543 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.51□□□□□ -1.53
NID1P14543 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.51□□□□□ -1.53
NID1P14543 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.51□□□□□ -1.53
NID1P14543 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NID1P14543 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
NID1P14543 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
NID1P14543 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
NID1P14543 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
NID1P14543 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NID1P14543 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
NID1P14543 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.5□□□□□ -1.53
NID1P14543 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
NID1P14543 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC5.5□□□□□ -1.53
NID1P14543 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
NID1P14543 RN7SKP128-201ENST00000364270 303 ntBASIC5.5□□□□□ -1.53
NID1P14543 RNU6-61P-201ENST00000365528 109 ntBASIC5.5□□□□□ -1.53
NID1P14543 SNORA24.1-201ENST00000384401 135 ntBASIC5.5□□□□□ -1.53
NID1P14543 RNU6-225P-201ENST00000384613 103 ntBASIC5.5□□□□□ -1.53
NID1P14543 RNU6-55P-201ENST00000411092 107 ntBASIC5.5□□□□□ -1.53
NID1P14543 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.5□□□□□ -1.53
NID1P14543 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.5□□□□□ -1.53
NID1P14543 BX682237.1-201ENST00000415016 335 ntBASIC5.5□□□□□ -1.53
NID1P14543 AC099677.3-201ENST00000427081 395 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms