Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 PLGLA-201ENST00000465668 449 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 SIAH1P1-201ENST00000479411 923 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.01□□□□□ -1.61
COL6A2P12110 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC5.01□□□□□ -1.61
COL6A2P12110 AC093853.1-201ENST00000515689 483 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 RNA5SP362-201ENST00000516048 118 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 RNU6-835P-201ENST00000516974 104 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC5.01□□□□□ -1.61
COL6A2P12110 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC5.01□□□□□ -1.61
COL6A2P12110 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.01□□□□□ -1.61
COL6A2P12110 HIF1AP1-201ENST00000553642 175 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 SETP2-201ENST00000553886 926 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.01□□□□□ -1.61
COL6A2P12110 AC007225.2-201ENST00000562529 256 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 AL138976.2-201ENST00000563989 694 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 AC055876.1-202ENST00000567053 138 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 AC090615.1-201ENST00000577519 154 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 RN7SL802P-201ENST00000577858 299 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.01□□□□□ -1.61
COL6A2P12110 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC5.01□□□□□ -1.61
COL6A2P12110 RPL26P30-202ENST00000602923 645 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.01□□□□□ -1.61
COL6A2P12110 AL391813.2-201ENST00000609113 322 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.01□□□□□ -1.61
COL6A2P12110 AC009233.1-201ENST00000616477 371 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 AC007742.2-201ENST00000618226 398 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC5.01□□□□□ -1.61
COL6A2P12110 YWHAEP7-203ENST00000622054 312 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 AC138649.5-201ENST00000637456 137 ntBASIC5.01□□□□□ -1.61
COL6A2P12110 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
COL6A2P12110 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL6A2P12110 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL6A2P12110 ACTR3BP5-201ENST00000448440 1479 ntBASIC5□□□□□ -1.61
COL6A2P12110 PHKBP1-201ENST00000450951 1951 ntBASIC5□□□□□ -1.61
COL6A2P12110 OR52B1P-201ENST00000316506 909 ntBASIC5□□□□□ -1.61
COL6A2P12110 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
COL6A2P12110 RNU6-451P-201ENST00000362921 107 ntBASIC5□□□□□ -1.61
COL6A2P12110 RNU6-359P-201ENST00000365466 108 ntBASIC5□□□□□ -1.61
COL6A2P12110 XGY1-201ENST00000381172 446 ntBASIC5□□□□□ -1.61
COL6A2P12110 Y_RNA.509-201ENST00000384506 99 ntBASIC5□□□□□ -1.61
COL6A2P12110 MIR143-201ENST00000385300 106 ntBASIC5□□□□□ -1.61
COL6A2P12110 U3.25-201ENST00000391209 220 ntBASIC5□□□□□ -1.61
COL6A2P12110 AL078599.1-201ENST00000402075 293 ntBASIC5□□□□□ -1.61
COL6A2P12110 RPL31P52-201ENST00000407532 367 ntBASIC5□□□□□ -1.61
COL6A2P12110 EIF4A1P3-201ENST00000411521 244 ntBASIC5□□□□□ -1.61
COL6A2P12110 TRAPPC2P10-201ENST00000415662 323 ntBASIC5□□□□□ -1.61
COL6A2P12110 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5□□□□□ -1.61
COL6A2P12110 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5□□□□□ -1.61
COL6A2P12110 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC5□□□□□ -1.61
COL6A2P12110 USP9YP9-201ENST00000429406 715 ntBASIC5□□□□□ -1.61
COL6A2P12110 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL6A2P12110 RPL12P46-201ENST00000436610 195 ntBASIC5□□□□□ -1.61
COL6A2P12110 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5□□□□□ -1.61
COL6A2P12110 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5□□□□□ -1.61
COL6A2P12110 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC5□□□□□ -1.61
COL6A2P12110 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC5□□□□□ -1.61
COL6A2P12110 AC239809.1-201ENST00000450470 217 ntBASIC5□□□□□ -1.61
COL6A2P12110 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC5□□□□□ -1.61
COL6A2P12110 AL591473.1-201ENST00000464297 313 ntBASIC5□□□□□ -1.61
COL6A2P12110 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5□□□□□ -1.61
COL6A2P12110 AL136038.1-201ENST00000497246 351 ntBASIC5□□□□□ -1.61
COL6A2P12110 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5□□□□□ -1.61
COL6A2P12110 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC5□□□□□ -1.61
COL6A2P12110 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5□□□□□ -1.61
COL6A2P12110 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5□□□□□ -1.61
COL6A2P12110 AC051619.2-201ENST00000559063 397 ntBASIC5□□□□□ -1.61
COL6A2P12110 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC5□□□□□ -1.61
COL6A2P12110 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5□□□□□ -1.61
COL6A2P12110 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5□□□□□ -1.61
COL6A2P12110 AC019193.2-201ENST00000610012 634 ntBASIC5□□□□□ -1.61
COL6A2P12110 MTND1P37-201ENST00000636562 264 ntBASIC5□□□□□ -1.61
COL6A2P12110 AC024614.3-201ENST00000637860 256 ntBASIC5□□□□□ -1.61
COL6A2P12110 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5□□□□□ -1.61
COL6A2P12110 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5□□□□□ -1.61
COL6A2P12110 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5□□□□□ -1.61
COL6A2P12110 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL6A2P12110 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL6A2P12110 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL6A2P12110 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5□□□□□ -1.61
COL6A2P12110 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5□□□□□ -1.61
COL6A2P12110 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5□□□□□ -1.61
COL6A2P12110 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5□□□□□ -1.61
COL6A2P12110 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
COL6A2P12110 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
COL6A2P12110 AC000123.3-201ENST00000624029 4975 ntBASIC4.99□□□□□ -1.61
COL6A2P12110 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.99□□□□□ -1.61
COL6A2P12110 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
COL6A2P12110 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
COL6A2P12110 DHX9P1-201ENST00000436565 3076 ntBASIC4.99□□□□□ -1.61
COL6A2P12110 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL6A2P12110 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
COL6A2P12110 RNA5SP183-201ENST00000362452 119 ntBASIC4.99□□□□□ -1.61
COL6A2P12110 RNA5SP258-201ENST00000362750 119 ntBASIC4.99□□□□□ -1.61
COL6A2P12110 RNU6-1207P-201ENST00000384343 107 ntBASIC4.99□□□□□ -1.61
COL6A2P12110 Y_RNA.535-201ENST00000384612 99 ntBASIC4.99□□□□□ -1.61
COL6A2P12110 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.99□□□□□ -1.61
COL6A2P12110 SNRPFP1-201ENST00000414761 252 ntBASIC4.99□□□□□ -1.61
COL6A2P12110 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.99□□□□□ -1.61
COL6A2P12110 UQCRBP1-201ENST00000421129 336 ntBASIC4.99□□□□□ -1.61
COL6A2P12110 PSMA6P3-201ENST00000428242 164 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms