Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.4□□□□□ -1.87
TPM1P09493 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.4□□□□□ -1.87
TPM1P09493 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.4□□□□□ -1.87
TPM1P09493 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.4□□□□□ -1.87
TPM1P09493 MTCO3P13-201ENST00000577757 781 ntBASIC3.4□□□□□ -1.87
TPM1P09493 MIR2682-201ENST00000580305 110 ntBASIC3.4□□□□□ -1.87
TPM1P09493 BDH2P1-201ENST00000602288 736 ntBASIC3.4□□□□□ -1.87
TPM1P09493 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.4□□□□□ -1.87
TPM1P09493 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
TPM1P09493 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TPM1P09493 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.39□□□□□ -1.87
TPM1P09493 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.39□□□□□ -1.87
TPM1P09493 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC3.39□□□□□ -1.87
TPM1P09493 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.39□□□□□ -1.87
TPM1P09493 RNU6-1077P-201ENST00000410506 102 ntBASIC3.39□□□□□ -1.87
TPM1P09493 CYCSP19-201ENST00000411715 316 ntBASIC3.39□□□□□ -1.87
TPM1P09493 OFD1P18Y-201ENST00000420889 959 ntBASIC3.39□□□□□ -1.87
TPM1P09493 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TPM1P09493 AC233728.2-201ENST00000425348 757 ntBASIC3.39□□□□□ -1.87
TPM1P09493 RPL36P19-201ENST00000430744 301 ntBASIC3.39□□□□□ -1.87
TPM1P09493 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.39□□□□□ -1.87
TPM1P09493 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC3.39□□□□□ -1.87
TPM1P09493 RPS26P56-201ENST00000444468 240 ntBASIC3.39□□□□□ -1.87
TPM1P09493 AC233982.1-201ENST00000451247 436 ntBASIC3.39□□□□□ -1.87
TPM1P09493 GSTA11P-201ENST00000452866 669 ntBASIC3.39□□□□□ -1.87
TPM1P09493 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.39□□□□□ -1.87
TPM1P09493 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.39□□□□□ -1.87
TPM1P09493 RPL23AP11-201ENST00000475260 469 ntBASIC3.39□□□□□ -1.87
TPM1P09493 AC017015.1-201ENST00000477387 286 ntBASIC3.39□□□□□ -1.87
TPM1P09493 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC3.39□□□□□ -1.87
TPM1P09493 AC110794.1-201ENST00000505816 425 ntBASIC3.39□□□□□ -1.87
TPM1P09493 HMGN1P15-201ENST00000513870 295 ntBASIC3.39□□□□□ -1.87
TPM1P09493 AC104986.1-201ENST00000517978 436 ntBASIC3.39□□□□□ -1.87
TPM1P09493 AC019227.1-201ENST00000526902 510 ntBASIC3.39□□□□□ -1.87
TPM1P09493 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.39□□□□□ -1.87
TPM1P09493 OR8I1P-201ENST00000529291 931 ntBASIC3.39□□□□□ -1.87
TPM1P09493 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.39□□□□□ -1.87
TPM1P09493 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.39□□□□□ -1.87
TPM1P09493 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.39□□□□□ -1.87
TPM1P09493 AC024941.1-201ENST00000612250 334 ntBASIC3.39□□□□□ -1.87
TPM1P09493 AC107871.2-201ENST00000612894 502 ntBASIC3.39□□□□□ -1.87
TPM1P09493 AC068724.3-201ENST00000625906 87 ntBASIC3.39□□□□□ -1.87
TPM1P09493 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TPM1P09493 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TPM1P09493 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
TPM1P09493 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TPM1P09493 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
TPM1P09493 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TPM1P09493 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TPM1P09493 RNU6-263P-201ENST00000363811 107 ntBASIC3.38□□□□□ -1.87
TPM1P09493 RPS3AP26-201ENST00000398259 784 ntBASIC3.38□□□□□ -1.87
TPM1P09493 RPS29P4-201ENST00000414733 161 ntBASIC3.38□□□□□ -1.87
TPM1P09493 SYF2P2-201ENST00000417620 583 ntBASIC3.38□□□□□ -1.87
TPM1P09493 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC3.38□□□□□ -1.87
TPM1P09493 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.38□□□□□ -1.87
TPM1P09493 RPL21P110-201ENST00000433345 446 ntBASIC3.38□□□□□ -1.87
TPM1P09493 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.38□□□□□ -1.87
TPM1P09493 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC3.38□□□□□ -1.87
TPM1P09493 AC007389.2-201ENST00000434630 306 ntBASIC3.38□□□□□ -1.87
TPM1P09493 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.38□□□□□ -1.87
TPM1P09493 AL590639.1-201ENST00000456484 337 ntBASIC3.38□□□□□ -1.87
TPM1P09493 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TPM1P09493 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.38□□□□□ -1.87
TPM1P09493 MTCO1P31-201ENST00000506355 492 ntBASIC3.38□□□□□ -1.87
TPM1P09493 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.38□□□□□ -1.87
TPM1P09493 OR5AK3P-201ENST00000527486 1297 ntBASIC3.38□□□□□ -1.87
TPM1P09493 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.38□□□□□ -1.87
TPM1P09493 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TPM1P09493 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.38□□□□□ -1.87
TPM1P09493 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.38□□□□□ -1.87
TPM1P09493 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.38□□□□□ -1.87
TPM1P09493 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.38□□□□□ -1.87
TPM1P09493 AC008687.2-201ENST00000597865 520 ntBASIC3.38□□□□□ -1.87
TPM1P09493 AC113368.1-201ENST00000603736 382 ntBASIC3.38□□□□□ -1.87
TPM1P09493 AC079610.2-201ENST00000604818 690 ntBASIC3.38□□□□□ -1.87
TPM1P09493 U3.45-201ENST00000607547 219 ntBASIC3.38□□□□□ -1.87
TPM1P09493 AC131902.3-201ENST00000611767 581 ntBASIC3.38□□□□□ -1.87
TPM1P09493 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC3.38□□□□□ -1.87
TPM1P09493 AL355365.1-201ENST00000616480 294 ntBASIC3.38□□□□□ -1.87
TPM1P09493 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC3.38□□□□□ -1.87
TPM1P09493 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TPM1P09493 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TPM1P09493 AC092447.7-201ENST00000422212 1621 ntBASIC3.37□□□□□ -1.87
TPM1P09493 SNORA51.12-201ENST00000384448 134 ntBASIC3.37□□□□□ -1.87
TPM1P09493 MT-TC-201ENST00000387405 66 ntBASIC3.37□□□□□ -1.87
TPM1P09493 TAF9BP1-201ENST00000396646 746 ntBASIC3.37□□□□□ -1.87
TPM1P09493 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
TPM1P09493 RPL7P25-201ENST00000404151 721 ntBASIC3.37□□□□□ -1.87
TPM1P09493 RNA5SP56-201ENST00000410277 118 ntBASIC3.37□□□□□ -1.87
TPM1P09493 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.37□□□□□ -1.87
TPM1P09493 RAD23BP2-201ENST00000416003 1207 ntBASIC3.37□□□□□ -1.87
TPM1P09493 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC3.37□□□□□ -1.87
TPM1P09493 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.37□□□□□ -1.87
TPM1P09493 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.37□□□□□ -1.87
TPM1P09493 RABEPKP1-201ENST00000440529 1026 ntBASIC3.37□□□□□ -1.87
TPM1P09493 AC004865.1-201ENST00000442276 1003 ntBASIC3.37□□□□□ -1.87
TPM1P09493 AL034418.1-201ENST00000448675 860 ntBASIC3.37□□□□□ -1.87
TPM1P09493 AC008280.2-201ENST00000455473 307 ntBASIC3.37□□□□□ -1.87
TPM1P09493 snoU13.4-201ENST00000458916 104 ntBASIC3.37□□□□□ -1.87
TPM1P09493 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms