Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFAP04085 RNU6-593P-201ENST00000364716 112 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 SNORA43.1-201ENST00000364863 140 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 RNU6-1127P-201ENST00000384580 107 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 RNU6-1106P-201ENST00000390845 107 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 RNA5SP219-201ENST00000390940 113 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 RNU6-821P-201ENST00000390995 107 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 AL096829.1-201ENST00000413677 457 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 RPL35AP3-201ENST00000414680 288 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 SDHDP6-201ENST00000414693 480 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 AC093155.2-201ENST00000420734 937 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.6□□□□□ -1.51
PDGFAP04085 AL590609.2-201ENST00000421430 368 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 RPL30P3-201ENST00000424262 333 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 SNAP23P1-201ENST00000433229 246 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.6□□□□□ -1.51
PDGFAP04085 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.6□□□□□ -1.51
PDGFAP04085 RPS15AP27-201ENST00000449183 343 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.6□□□□□ -1.51
PDGFAP04085 RPL21P93-201ENST00000480465 489 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFAP04085 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
PDGFAP04085 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.6□□□□□ -1.51
PDGFAP04085 RNU6-685P-201ENST00000517088 95 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.6□□□□□ -1.51
PDGFAP04085 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC5.6□□□□□ -1.51
PDGFAP04085 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.6□□□□□ -1.51
PDGFAP04085 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.6□□□□□ -1.51
PDGFAP04085 AC009120.3-201ENST00000563335 499 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 AC010547.6-201ENST00000571789 193 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 TXNP4-201ENST00000575018 310 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.6□□□□□ -1.51
PDGFAP04085 AC025857.2-201ENST00000602711 238 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 AC006006.1-201ENST00000603082 144 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 AC006254.3-201ENST00000603353 884 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 AL589674.2-201ENST00000604304 337 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC5.6□□□□□ -1.51
PDGFAP04085 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PDGFAP04085 MIR4496-201ENST00000635896 61 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 AL596275.2-204ENST00000641628 552 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 AL596275.2-206ENST00000641957 626 ntBASIC5.6□□□□□ -1.51
PDGFAP04085 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFAP04085 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFAP04085 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFAP04085 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
PDGFAP04085 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
PDGFAP04085 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.6□□□□□ -1.51
PDGFAP04085 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
PDGFAP04085 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
PDGFAP04085 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.6□□□□□ -1.51
PDGFAP04085 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFAP04085 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFAP04085 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFAP04085 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFAP04085 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.59□□□□□ -1.51
PDGFAP04085 AC024587.1-201ENST00000505925 2157 ntBASIC5.59□□□□□ -1.51
PDGFAP04085 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFAP04085 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFAP04085 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.59□□□□□ -1.51
PDGFAP04085 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFAP04085 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFAP04085 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
PDGFAP04085 RPS3AP2-201ENST00000407190 754 ntBASIC5.59□□□□□ -1.51
PDGFAP04085 MIR1250-201ENST00000408098 113 ntBASIC5.59□□□□□ -1.51
PDGFAP04085 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFAP04085 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.59□□□□□ -1.51
PDGFAP04085 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC5.59□□□□□ -1.51
PDGFAP04085 AL360081.1-201ENST00000428299 555 ntBASIC5.59□□□□□ -1.51
PDGFAP04085 PSMA2P3-201ENST00000429685 675 ntBASIC5.59□□□□□ -1.51
PDGFAP04085 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.59□□□□□ -1.51
PDGFAP04085 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.59□□□□□ -1.51
PDGFAP04085 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC5.59□□□□□ -1.51
PDGFAP04085 AC019185.1-201ENST00000442718 389 ntBASIC5.59□□□□□ -1.51
PDGFAP04085 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.59□□□□□ -1.51
PDGFAP04085 AL162388.1-201ENST00000450912 352 ntBASIC5.59□□□□□ -1.51
PDGFAP04085 GEMIN2P1-201ENST00000454246 752 ntBASIC5.59□□□□□ -1.51
PDGFAP04085 AC007967.1-201ENST00000455422 1159 ntBASIC5.59□□□□□ -1.51
PDGFAP04085 MTCO3P10-201ENST00000455912 772 ntBASIC5.59□□□□□ -1.51
PDGFAP04085 AC008481.1-201ENST00000463278 396 ntBASIC5.59□□□□□ -1.51
PDGFAP04085 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.59□□□□□ -1.51
PDGFAP04085 AC092865.4-201ENST00000477936 615 ntBASIC5.59□□□□□ -1.51
PDGFAP04085 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.59□□□□□ -1.51
PDGFAP04085 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.59□□□□□ -1.51
PDGFAP04085 RN7SKP295-201ENST00000517264 153 ntBASIC5.59□□□□□ -1.51
PDGFAP04085 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.59□□□□□ -1.51
PDGFAP04085 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.59□□□□□ -1.51
PDGFAP04085 AC022790.1-201ENST00000522872 204 ntBASIC5.59□□□□□ -1.51
PDGFAP04085 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.59□□□□□ -1.51
PDGFAP04085 MIR4512-201ENST00000583257 77 ntBASIC5.59□□□□□ -1.51
PDGFAP04085 AC027229.1-201ENST00000583887 253 ntBASIC5.59□□□□□ -1.51
PDGFAP04085 AC008521.1-201ENST00000587471 187 ntBASIC5.59□□□□□ -1.51
PDGFAP04085 AL138889.2-201ENST00000603883 242 ntBASIC5.59□□□□□ -1.51
PDGFAP04085 AC090510.2-201ENST00000617465 629 ntBASIC5.59□□□□□ -1.51
PDGFAP04085 AC098657.3-201ENST00000620434 263 ntBASIC5.59□□□□□ -1.51
PDGFAP04085 AL589994.2-201ENST00000621124 579 ntBASIC5.59□□□□□ -1.51
PDGFAP04085 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
PDGFAP04085 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
PDGFAP04085 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.59□□□□□ -1.51
PDGFAP04085 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms