Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.83□□□□□ -1.8
VTNP04004 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.83□□□□□ -1.8
VTNP04004 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.83□□□□□ -1.8
VTNP04004 GTF2IP23-201ENST00000423746 351 ntBASIC3.83□□□□□ -1.8
VTNP04004 AC005326.1-201ENST00000429197 123 ntBASIC3.83□□□□□ -1.8
VTNP04004 PPIAP17-201ENST00000438507 471 ntBASIC3.83□□□□□ -1.8
VTNP04004 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.83□□□□□ -1.8
VTNP04004 RNF148-202ENST00000447240 839 ntTSL 2 BASIC3.83□□□□□ -1.8
VTNP04004 RPL7P59-201ENST00000447700 943 ntBASIC3.83□□□□□ -1.8
VTNP04004 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.83□□□□□ -1.8
VTNP04004 AL162388.1-201ENST00000450912 352 ntBASIC3.83□□□□□ -1.8
VTNP04004 ANP32BP2-201ENST00000454525 545 ntBASIC3.83□□□□□ -1.8
VTNP04004 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.83□□□□□ -1.8
VTNP04004 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.83□□□□□ -1.8
VTNP04004 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VTNP04004 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.83□□□□□ -1.8
VTNP04004 AC091951.3-201ENST00000504093 246 ntBASIC3.83□□□□□ -1.8
VTNP04004 AC005351.1-201ENST00000511152 786 ntBASIC3.83□□□□□ -1.8
VTNP04004 RN7SKP96-201ENST00000516948 297 ntBASIC3.83□□□□□ -1.8
VTNP04004 AC008489.1-201ENST00000524271 483 ntBASIC3.83□□□□□ -1.8
VTNP04004 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VTNP04004 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.83□□□□□ -1.8
VTNP04004 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VTNP04004 AC004217.3-201ENST00000551552 878 ntBASIC3.83□□□□□ -1.8
VTNP04004 AC009097.3-201ENST00000563557 1018 ntBASIC3.83□□□□□ -1.8
VTNP04004 AC037471.2-201ENST00000564941 598 ntBASIC3.83□□□□□ -1.8
VTNP04004 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.83□□□□□ -1.8
VTNP04004 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.83□□□□□ -1.8
VTNP04004 GAS5-AS1-201ENST00000602767 694 ntBASIC3.83□□□□□ -1.8
VTNP04004 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC3.83□□□□□ -1.8
VTNP04004 AL355493.4-201ENST00000618530 292 ntBASIC3.83□□□□□ -1.8
VTNP04004 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.83□□□□□ -1.8
VTNP04004 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
VTNP04004 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.83□□□□□ -1.8
VTNP04004 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VTNP04004 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
VTNP04004 ZNF876P-202ENST00000398732 1485 ntBASIC3.83□□□□□ -1.8
VTNP04004 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VTNP04004 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
VTNP04004 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.83□□□□□ -1.8
VTNP04004 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.83□□□□□ -1.8
VTNP04004 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.83□□□□□ -1.8
VTNP04004 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
VTNP04004 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
VTNP04004 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VTNP04004 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
VTNP04004 XPOTP1-201ENST00000443317 2398 ntBASIC3.82□□□□□ -1.8
VTNP04004 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VTNP04004 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VTNP04004 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VTNP04004 MTND4P8-201ENST00000514997 1362 ntBASIC3.82□□□□□ -1.8
VTNP04004 RNU6-707P-201ENST00000364647 95 ntBASIC3.82□□□□□ -1.8
VTNP04004 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
VTNP04004 ZNF603P-201ENST00000405613 487 ntBASIC3.82□□□□□ -1.8
VTNP04004 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.82□□□□□ -1.8
VTNP04004 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.82□□□□□ -1.8
VTNP04004 AC084290.1-201ENST00000434995 374 ntBASIC3.82□□□□□ -1.8
VTNP04004 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.82□□□□□ -1.8
VTNP04004 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
VTNP04004 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.82□□□□□ -1.8
VTNP04004 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.82□□□□□ -1.8
VTNP04004 AC023598.1-201ENST00000472521 361 ntBASIC3.82□□□□□ -1.8
VTNP04004 GAPDHP39-201ENST00000481866 979 ntBASIC3.82□□□□□ -1.8
VTNP04004 RPL32P34-201ENST00000486380 400 ntBASIC3.82□□□□□ -1.8
VTNP04004 AC093663.1-201ENST00000497190 394 ntBASIC3.82□□□□□ -1.8
VTNP04004 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.82□□□□□ -1.8
VTNP04004 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.82□□□□□ -1.8
VTNP04004 SNORA74D-201ENST00000516404 141 ntBASIC3.82□□□□□ -1.8
VTNP04004 IGLVIV-53-201ENST00000520107 367 ntBASIC3.82□□□□□ -1.8
VTNP04004 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.82□□□□□ -1.8
VTNP04004 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.82□□□□□ -1.8
VTNP04004 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.82□□□□□ -1.8
VTNP04004 AF279873.1-201ENST00000523393 313 ntBASIC3.82□□□□□ -1.8
VTNP04004 OR4C2P-201ENST00000530855 1064 ntBASIC3.82□□□□□ -1.8
VTNP04004 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.82□□□□□ -1.8
VTNP04004 AC023538.1-201ENST00000534576 736 ntBASIC3.82□□□□□ -1.8
VTNP04004 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.82□□□□□ -1.8
VTNP04004 AC074029.1-201ENST00000552531 1044 ntBASIC3.82□□□□□ -1.8
VTNP04004 AL133457.1-201ENST00000564251 987 ntBASIC3.82□□□□□ -1.8
VTNP04004 AC061975.8-201ENST00000587058 721 ntBASIC3.82□□□□□ -1.8
VTNP04004 AP001269.3-201ENST00000588718 329 ntBASIC3.82□□□□□ -1.8
VTNP04004 AC091057.2-201ENST00000602594 792 ntBASIC3.82□□□□□ -1.8
VTNP04004 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.82□□□□□ -1.8
VTNP04004 MIR486-1-201ENST00000612171 68 ntBASIC3.82□□□□□ -1.8
VTNP04004 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.82□□□□□ -1.8
VTNP04004 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.82□□□□□ -1.8
VTNP04004 MIR3651-201ENST00000630427 90 ntBASIC3.82□□□□□ -1.8
VTNP04004 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
VTNP04004 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VTNP04004 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.82□□□□□ -1.8
VTNP04004 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
VTNP04004 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.82□□□□□ -1.8
VTNP04004 NCAPGP1-201ENST00000505112 1814 ntBASIC3.81□□□□□ -1.8
VTNP04004 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
VTNP04004 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
VTNP04004 RNA5SP502-201ENST00000362694 119 ntBASIC3.81□□□□□ -1.8
VTNP04004 SNORD116.1-201ENST00000365628 92 ntBASIC3.81□□□□□ -1.8
VTNP04004 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.81□□□□□ -1.8
VTNP04004 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
VTNP04004 RNU6-1279P-201ENST00000383917 103 ntBASIC3.81□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms