Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC022960.2-201ENST00000616300 666 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 AC009159.1-201ENST00000618386 642 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 XKRY2-202ENST00000623874 1581 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 XKRY-202ENST00000624960 1581 ntBASIC2.98□□□□□ -1.93
COL4A1P02462 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
COL4A1P02462 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC2.97□□□□□ -1.93
COL4A1P02462 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL4A1P02462 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
COL4A1P02462 RNU1-87P-201ENST00000363727 170 ntBASIC2.97□□□□□ -1.93
COL4A1P02462 AL590290.1-201ENST00000405336 380 ntBASIC2.97□□□□□ -1.93
COL4A1P02462 AL162578.1-201ENST00000406202 378 ntBASIC2.97□□□□□ -1.93
COL4A1P02462 OR51A3P-201ENST00000413596 924 ntBASIC2.97□□□□□ -1.93
COL4A1P02462 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.97□□□□□ -1.93
COL4A1P02462 AL606490.7-201ENST00000433136 191 ntBASIC2.97□□□□□ -1.93
COL4A1P02462 RNU6-1334P-201ENST00000516032 105 ntBASIC2.97□□□□□ -1.93
COL4A1P02462 RNA5SP380-201ENST00000517190 98 ntBASIC2.97□□□□□ -1.93
COL4A1P02462 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC2.97□□□□□ -1.93
COL4A1P02462 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC2.97□□□□□ -1.93
COL4A1P02462 OR4A45P-201ENST00000529954 901 ntBASIC2.97□□□□□ -1.93
COL4A1P02462 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC2.97□□□□□ -1.93
COL4A1P02462 AP002770.2-201ENST00000543613 532 ntBASIC2.97□□□□□ -1.93
COL4A1P02462 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.97□□□□□ -1.93
COL4A1P02462 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.97□□□□□ -1.93
COL4A1P02462 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.97□□□□□ -1.93
COL4A1P02462 AC010928.3-201ENST00000587712 541 ntBASIC2.97□□□□□ -1.93
COL4A1P02462 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
COL4A1P02462 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
COL4A1P02462 AC093908.1-201ENST00000623125 8092 ntBASIC2.97□□□□□ -1.93
COL4A1P02462 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.96□□□□□ -1.93
COL4A1P02462 AL606537.1-201ENST00000607258 2011 ntBASIC2.96□□□□□ -1.94
COL4A1P02462 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL4A1P02462 RNU4-26P-201ENST00000410270 107 ntBASIC2.96□□□□□ -1.94
COL4A1P02462 AC008565.1-201ENST00000509046 885 ntBASIC2.96□□□□□ -1.94
COL4A1P02462 AC026436.1-201ENST00000510537 270 ntBASIC2.96□□□□□ -1.94
COL4A1P02462 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.96□□□□□ -1.94
COL4A1P02462 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.96□□□□□ -1.94
COL4A1P02462 MIR4648-201ENST00000580107 72 ntBASIC2.96□□□□□ -1.94
COL4A1P02462 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC2.96□□□□□ -1.94
COL4A1P02462 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.96□□□□□ -1.94
COL4A1P02462 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
COL4A1P02462 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
COL4A1P02462 RNU1-100P-201ENST00000365255 165 ntBASIC2.95□□□□□ -1.94
COL4A1P02462 MIR504-201ENST00000385065 83 ntBASIC2.95□□□□□ -1.94
COL4A1P02462 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL4A1P02462 RNA5SP129-201ENST00000410276 118 ntBASIC2.95□□□□□ -1.94
COL4A1P02462 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.95□□□□□ -1.94
COL4A1P02462 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC2.95□□□□□ -1.94
COL4A1P02462 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.95□□□□□ -1.94
COL4A1P02462 CREM-226ENST00000469949 721 ntTSL 3 BASIC2.95□□□□□ -1.94
COL4A1P02462 RNA5SP281-201ENST00000516504 135 ntBASIC2.95□□□□□ -1.94
COL4A1P02462 AP000873.5-201ENST00000533906 236 ntBASIC2.95□□□□□ -1.94
COL4A1P02462 OR7K1P-201ENST00000546439 926 ntBASIC2.95□□□□□ -1.94
COL4A1P02462 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC2.95□□□□□ -1.94
COL4A1P02462 BMS1P7-201ENST00000602440 1052 ntBASIC2.95□□□□□ -1.94
COL4A1P02462 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC2.95□□□□□ -1.94
COL4A1P02462 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
COL4A1P02462 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.95□□□□□ -1.94
COL4A1P02462 AC007342.7-201ENST00000624610 2337 ntBASIC2.95□□□□□ -1.94
COL4A1P02462 AC097714.1-201ENST00000511272 1647 ntBASIC2.95□□□□□ -1.94
COL4A1P02462 AC009313.2-201ENST00000417893 1941 ntBASIC2.95□□□□□ -1.94
COL4A1P02462 RNU6-304P-201ENST00000364855 107 ntBASIC2.95□□□□□ -1.94
COL4A1P02462 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.95□□□□□ -1.94
COL4A1P02462 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.95□□□□□ -1.94
COL4A1P02462 AC234781.4-201ENST00000419384 244 ntBASIC2.95□□□□□ -1.94
COL4A1P02462 RPS12P2-201ENST00000439728 269 ntBASIC2.95□□□□□ -1.94
COL4A1P02462 AC107015.1-201ENST00000466902 747 ntBASIC2.95□□□□□ -1.94
COL4A1P02462 AC017007.3-201ENST00000479865 435 ntBASIC2.95□□□□□ -1.94
COL4A1P02462 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC2.95□□□□□ -1.94
COL4A1P02462 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.95□□□□□ -1.94
COL4A1P02462 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC2.95□□□□□ -1.94
COL4A1P02462 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.95□□□□□ -1.94
COL4A1P02462 AC078899.5-201ENST00000612475 178 ntBASIC2.95□□□□□ -1.94
COL4A1P02462 AC004925.1-201ENST00000624256 2706 ntBASIC2.95□□□□□ -1.94
COL4A1P02462 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC2.94□□□□□ -1.94
COL4A1P02462 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL4A1P02462 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
COL4A1P02462 RNA5SP456-201ENST00000364002 114 ntBASIC2.94□□□□□ -1.94
COL4A1P02462 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
COL4A1P02462 EI24P2-201ENST00000397776 1076 ntBASIC2.94□□□□□ -1.94
COL4A1P02462 LSM5-206ENST00000409987 504 ntTSL 5 BASIC2.94□□□□□ -1.94
COL4A1P02462 RPS20P25-201ENST00000412447 352 ntBASIC2.94□□□□□ -1.94
COL4A1P02462 AL158825.1-201ENST00000414735 521 ntBASIC2.94□□□□□ -1.94
COL4A1P02462 AL135786.1-201ENST00000415892 214 ntBASIC2.94□□□□□ -1.94
COL4A1P02462 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC2.94□□□□□ -1.94
COL4A1P02462 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC2.94□□□□□ -1.94
COL4A1P02462 LINC00888-204ENST00000487386 421 ntBASIC2.94□□□□□ -1.94
COL4A1P02462 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.94□□□□□ -1.94
COL4A1P02462 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.94□□□□□ -1.94
COL4A1P02462 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC2.94□□□□□ -1.94
COL4A1P02462 AP000867.2-201ENST00000532468 320 ntBASIC2.94□□□□□ -1.94
COL4A1P02462 PDCL2P2-201ENST00000533651 189 ntBASIC2.94□□□□□ -1.94
COL4A1P02462 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.94□□□□□ -1.94
COL4A1P02462 MIR1273D-201ENST00000577266 86 ntBASIC2.94□□□□□ -1.94
COL4A1P02462 AC090312.2-201ENST00000582687 378 ntBASIC2.94□□□□□ -1.94
COL4A1P02462 AC068313.1-201ENST00000604028 1008 ntBASIC2.94□□□□□ -1.94
COL4A1P02462 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
COL4A1P02462 RPS3AP26-201ENST00000398259 784 ntBASIC2.93□□□□□ -1.94
COL4A1P02462 RAP1BP1-201ENST00000412709 553 ntBASIC2.93□□□□□ -1.94
COL4A1P02462 IPMKP1-201ENST00000425988 855 ntBASIC2.93□□□□□ -1.94
COL4A1P02462 MTND4P2-201ENST00000507767 1203 ntBASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms