Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 RPL23AP69-201ENST00000431134 458 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 OR2B8P-201ENST00000432841 938 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 AC008264.1-201ENST00000447612 367 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HLA-DQA1P01909 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DQA1P01909 MRPL42P4-201ENST00000453267 443 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 SYPL1P1-201ENST00000473622 768 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 GAPDHP39-201ENST00000481866 979 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.6□□□□□ -1.99
HLA-DQA1P01909 AC005921.1-201ENST00000510589 286 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC2.6□□□□□ -1.99
HLA-DQA1P01909 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.6□□□□□ -1.99
HLA-DQA1P01909 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DQA1P01909 MIR4666A-201ENST00000580160 79 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 AC090616.5-202ENST00000582111 297 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.6□□□□□ -1.99
HLA-DQA1P01909 AP001542.2-201ENST00000593141 364 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.6□□□□□ -1.99
HLA-DQA1P01909 GAS5-AS1-201ENST00000602767 694 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 IGHV3-29-201ENST00000604817 344 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 AL583856.2-201ENST00000606298 543 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC2.6□□□□□ -1.99
HLA-DQA1P01909 AC090116.1-201ENST00000615679 446 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC2.6□□□□□ -1.99
HLA-DQA1P01909 U73479.1-201ENST00000618062 168 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.6□□□□□ -1.99
HLA-DQA1P01909 AP002371.2-201ENST00000624450 503 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 CCT7-217ENST00000626868 249 ntTSL 5 BASIC2.6□□□□□ -1.99
HLA-DQA1P01909 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.6□□□□□ -1.99
HLA-DQA1P01909 SUCLA2P2-201ENST00000417269 1309 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.6□□□□□ -1.99
HLA-DQA1P01909 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC2.6□□□□□ -1.99
HLA-DQA1P01909 MFSD8-233ENST00000641482 4860 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.6□□□□□ -1.99
HLA-DQA1P01909 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
HLA-DQA1P01909 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AC130650.2-201ENST00000618736 2403 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 RNU6-989P-201ENST00000362756 107 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 RNU6-251P-201ENST00000363235 104 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 RNU6-839P-201ENST00000363347 108 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 U3.6-201ENST00000363622 211 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 RNA5SP283-201ENST00000365604 119 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AC068538.1-201ENST00000376856 336 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AL121978.1-201ENST00000402778 359 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AL138880.1-201ENST00000405824 642 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 RNA5SP56-201ENST00000410277 118 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 RN7SKP123-201ENST00000410732 291 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 BOLA3P4-201ENST00000418151 400 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AL035410.1-201ENST00000427409 427 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 NPM1P13-201ENST00000452663 865 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AC007967.1-201ENST00000455422 1159 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 U3.44-201ENST00000458938 192 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 snoU13.3-201ENST00000459441 104 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AC068587.1-201ENST00000483613 781 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 VN1R105P-201ENST00000486595 910 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AC093267.1-201ENST00000489176 961 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 DYNLL1P6-201ENST00000503440 264 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AC026414.1-201ENST00000504046 698 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 SUMO2P5-201ENST00000506790 245 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AC010460.1-201ENST00000507087 466 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 PRELID3BP5-201ENST00000508612 460 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 FTH1P21-201ENST00000512179 511 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AC112206.4-201ENST00000515142 405 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AC104417.1-201ENST00000523974 751 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AC019227.1-201ENST00000526902 510 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AP004242.1-201ENST00000533701 349 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AC087897.1-201ENST00000550134 156 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AC126365.2-201ENST00000580630 379 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AC011468.4-201ENST00000603942 409 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AP002802.2-201ENST00000605877 235 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 AL513477.2-201ENST00000607858 568 ntBASIC2.59□□□□□ -1.99
HLA-DQA1P01909 MIR6875-201ENST00000617506 72 ntBASIC2.59□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms