Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC126121.1-201ENST00000482313 553 ntBASIC2.67□□□□□ -1.98
TNFP01375 RPL31P13-201ENST00000484151 370 ntBASIC2.67□□□□□ -1.98
TNFP01375 AC005921.1-201ENST00000510589 286 ntBASIC2.67□□□□□ -1.98
TNFP01375 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
TNFP01375 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.67□□□□□ -1.98
TNFP01375 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.67□□□□□ -1.98
TNFP01375 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.67□□□□□ -1.98
TNFP01375 AC103881.1-201ENST00000603476 538 ntBASIC2.67□□□□□ -1.98
TNFP01375 AC018754.1-201ENST00000607486 925 ntBASIC2.67□□□□□ -1.98
TNFP01375 AC093831.2-201ENST00000624393 3427 ntBASIC2.67□□□□□ -1.98
TNFP01375 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TNFP01375 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TNFP01375 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
TNFP01375 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.67□□□□□ -1.98
TNFP01375 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.66□□□□□ -1.98
TNFP01375 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.66□□□□□ -1.98
TNFP01375 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
TNFP01375 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.66□□□□□ -1.98
TNFP01375 RNA5SP295-201ENST00000362655 121 ntBASIC2.66□□□□□ -1.98
TNFP01375 MIR34A-201ENST00000385130 110 ntBASIC2.66□□□□□ -1.98
TNFP01375 AL031679.1-201ENST00000400616 525 ntBASIC2.66□□□□□ -1.98
TNFP01375 AL451074.5-201ENST00000415894 435 ntBASIC2.66□□□□□ -1.98
TNFP01375 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC2.66□□□□□ -1.98
TNFP01375 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC2.66□□□□□ -1.98
TNFP01375 AL160175.1-201ENST00000428124 247 ntBASIC2.66□□□□□ -1.98
TNFP01375 MTCO3P21-201ENST00000430791 643 ntBASIC2.66□□□□□ -1.98
TNFP01375 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.66□□□□□ -1.98
TNFP01375 AC003982.1-202ENST00000469928 248 ntBASIC2.66□□□□□ -1.98
TNFP01375 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC2.66□□□□□ -1.98
TNFP01375 AC126389.1-201ENST00000477436 290 ntBASIC2.66□□□□□ -1.98
TNFP01375 AP004217.1-201ENST00000480579 346 ntBASIC2.66□□□□□ -1.98
TNFP01375 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.66□□□□□ -1.98
TNFP01375 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.66□□□□□ -1.98
TNFP01375 HMGB3P15-201ENST00000507326 574 ntBASIC2.66□□□□□ -1.98
TNFP01375 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC2.66□□□□□ -1.98
TNFP01375 AC118465.1-201ENST00000513820 1271 ntBASIC2.66□□□□□ -1.98
TNFP01375 AC108471.1-201ENST00000513977 287 ntBASIC2.66□□□□□ -1.98
TNFP01375 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC2.66□□□□□ -1.98
TNFP01375 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
TNFP01375 AC007954.1-201ENST00000554198 494 ntBASIC2.66□□□□□ -1.98
TNFP01375 AC055876.1-202ENST00000567053 138 ntBASIC2.66□□□□□ -1.98
TNFP01375 AC083760.1-201ENST00000589621 670 ntBASIC2.66□□□□□ -1.98
TNFP01375 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC2.66□□□□□ -1.98
TNFP01375 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.66□□□□□ -1.98
TNFP01375 AC026790.2-201ENST00000606282 430 ntBASIC2.66□□□□□ -1.98
TNFP01375 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.66□□□□□ -1.98
TNFP01375 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
TNFP01375 AL353743.4-201ENST00000422653 1547 ntBASIC2.66□□□□□ -1.98
TNFP01375 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
TNFP01375 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.66□□□□□ -1.98
TNFP01375 AC108206.1-201ENST00000570186 4159 ntBASIC2.65□□□□□ -1.98
TNFP01375 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.65□□□□□ -1.98
TNFP01375 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
TNFP01375 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TNFP01375 SNORA31-201ENST00000362607 130 ntBASIC2.65□□□□□ -1.99
TNFP01375 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.65□□□□□ -1.99
TNFP01375 RN7SKP222-201ENST00000410651 315 ntBASIC2.65□□□□□ -1.99
TNFP01375 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.65□□□□□ -1.99
TNFP01375 RPS27P5-201ENST00000444247 244 ntBASIC2.65□□□□□ -1.99
TNFP01375 RPL23AP15-201ENST00000450202 459 ntBASIC2.65□□□□□ -1.99
TNFP01375 NPM1P13-201ENST00000452663 865 ntBASIC2.65□□□□□ -1.99
TNFP01375 DNAJC19P8-201ENST00000452887 259 ntBASIC2.65□□□□□ -1.99
TNFP01375 AC089999.1-201ENST00000460336 374 ntBASIC2.65□□□□□ -1.99
TNFP01375 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.65□□□□□ -1.99
TNFP01375 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.65□□□□□ -1.99
TNFP01375 AC008565.1-201ENST00000509046 885 ntBASIC2.65□□□□□ -1.99
TNFP01375 AC114781.4-201ENST00000513707 639 ntBASIC2.65□□□□□ -1.99
TNFP01375 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC2.65□□□□□ -1.99
TNFP01375 RNA5SP385-201ENST00000515947 110 ntBASIC2.65□□□□□ -1.99
TNFP01375 SNORA9.3-201ENST00000516383 129 ntBASIC2.65□□□□□ -1.99
TNFP01375 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.65□□□□□ -1.99
TNFP01375 AL163153.1-201ENST00000554223 283 ntBASIC2.65□□□□□ -1.99
TNFP01375 AC010735.1-201ENST00000567305 1026 ntBASIC2.65□□□□□ -1.99
TNFP01375 MIR3605-201ENST00000583214 100 ntBASIC2.65□□□□□ -1.99
TNFP01375 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC2.65□□□□□ -1.99
TNFP01375 RPL23AP92-201ENST00000603609 255 ntBASIC2.65□□□□□ -1.99
TNFP01375 AC123768.4-201ENST00000616244 701 ntBASIC2.65□□□□□ -1.99
TNFP01375 AC005858.4-201ENST00000623191 700 ntBASIC2.65□□□□□ -1.99
TNFP01375 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
TNFP01375 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC2.65□□□□□ -1.99
TNFP01375 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TNFP01375 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
TNFP01375 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TNFP01375 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.65□□□□□ -1.99
TNFP01375 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2.64□□□□□ -1.99
TNFP01375 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
TNFP01375 AL672167.1-206ENST00000356293 943 ntBASIC2.64□□□□□ -1.99
TNFP01375 RNA5SP189-201ENST00000364920 115 ntBASIC2.64□□□□□ -1.99
TNFP01375 MIR181A2-201ENST00000384863 110 ntBASIC2.64□□□□□ -1.99
TNFP01375 AL512633.1-201ENST00000399931 655 ntBASIC2.64□□□□□ -1.99
TNFP01375 GSTA12P-201ENST00000402398 508 ntBASIC2.64□□□□□ -1.99
TNFP01375 RN7SKP123-201ENST00000410732 291 ntBASIC2.64□□□□□ -1.99
TNFP01375 MRPL50P2-201ENST00000416821 482 ntBASIC2.64□□□□□ -1.99
TNFP01375 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.64□□□□□ -1.99
TNFP01375 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.64□□□□□ -1.99
TNFP01375 AC112220.1-201ENST00000434628 355 ntBASIC2.64□□□□□ -1.99
TNFP01375 ARPC3P2-201ENST00000457786 533 ntBASIC2.64□□□□□ -1.99
TNFP01375 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC2.64□□□□□ -1.99
TNFP01375 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC2.64□□□□□ -1.99
TNFP01375 TRBV8-1-201ENST00000481590 279 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms