Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
CNOT4O95628 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CNOT4O95628 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNOT4O95628 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CNOT4O95628 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNOT4O95628 AL445487.1-201ENST00000415694 1580 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 AC108467.2-201ENST00000617640 1597 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 OR5J1P-201ENST00000313544 939 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 ZBTB8OSP1-201ENST00000342688 498 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 Y_RNA.46-201ENST00000362695 102 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 RNA5SP335-201ENST00000363817 110 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 Y_RNA.381-201ENST00000365666 102 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 SNORA5.1-201ENST00000384275 131 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 RNU6-1226P-201ENST00000384317 107 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CNOT4O95628 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CNOT4O95628 MIR550A3-201ENST00000390735 95 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 RPS4XP8-201ENST00000402039 771 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 AL023807.1-201ENST00000407932 359 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 MIR1250-201ENST00000408098 113 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 SNRPFP1-201ENST00000414761 252 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 SRSF1P1-201ENST00000424058 520 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 AC093655.2-201ENST00000425735 631 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 CYCSP6-201ENST00000434498 302 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC4.8□□□□□ -1.64
CNOT4O95628 CEACAMP7-201ENST00000444105 496 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 AL136380.1-201ENST00000447970 162 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.8□□□□□ -1.64
CNOT4O95628 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.8□□□□□ -1.64
CNOT4O95628 AP000797.2-201ENST00000475768 606 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 RPL7AP6-201ENST00000477943 801 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 AC023424.1-201ENST00000496058 459 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 RPSAP51-201ENST00000497462 645 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.8□□□□□ -1.64
CNOT4O95628 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.8□□□□□ -1.64
CNOT4O95628 RNU6-327P-201ENST00000516270 127 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 RNU6-201P-201ENST00000517100 61 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 AC022616.6-201ENST00000520479 119 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 HMGB1P40-201ENST00000525121 540 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC4.8□□□□□ -1.64
CNOT4O95628 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC4.8□□□□□ -1.64
CNOT4O95628 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.8□□□□□ -1.64
CNOT4O95628 SNORD39.3-201ENST00000584451 71 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.8□□□□□ -1.64
CNOT4O95628 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNOT4O95628 AC011468.4-201ENST00000603942 409 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 AC008966.2-201ENST00000606157 453 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 DISC2.1-201ENST00000612827 205 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 AC109583.2-201ENST00000617367 129 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 AC010149.2-201ENST00000637608 315 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 MIR1302-1-201ENST00000637932 143 ntBASIC4.8□□□□□ -1.64
CNOT4O95628 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.8□□□□□ -1.64
CNOT4O95628 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CNOT4O95628 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNOT4O95628 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNOT4O95628 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNOT4O95628 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CNOT4O95628 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CNOT4O95628 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
CNOT4O95628 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNOT4O95628 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.79□□□□□ -1.64
CNOT4O95628 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNOT4O95628 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNOT4O95628 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.79□□□□□ -1.64
CNOT4O95628 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CNOT4O95628 RPL23AP57-201ENST00000332361 466 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 AC005294.1-201ENST00000355509 281 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 Y_RNA.67-201ENST00000362870 100 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 RNU6-456P-201ENST00000384493 107 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 SNORD56.6-201ENST00000384569 71 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 RNA5SP339-201ENST00000390987 122 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 RNU6-952P-201ENST00000391164 108 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 AL645733.1-201ENST00000402250 217 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 RPL12P9-201ENST00000412942 488 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.79□□□□□ -1.64
CNOT4O95628 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.79□□□□□ -1.64
CNOT4O95628 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.79□□□□□ -1.64
CNOT4O95628 MTCO2P5-201ENST00000422621 426 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.79□□□□□ -1.64
CNOT4O95628 MED28P3-201ENST00000444288 531 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.79□□□□□ -1.64
CNOT4O95628 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.79□□□□□ -1.64
CNOT4O95628 NDUFS5P3-201ENST00000450668 321 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 BX842559.2-201ENST00000451418 605 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 AC009963.2-201ENST00000453431 138 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 AL121877.1-201ENST00000453704 622 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC4.79□□□□□ -1.64
CNOT4O95628 AL513533.1-201ENST00000453728 415 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.79□□□□□ -1.64
CNOT4O95628 RNU6-261P-201ENST00000459506 102 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 AC063943.1-201ENST00000465434 453 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 AC096576.1-201ENST00000489014 359 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CNOT4O95628 TMEM251P1-201ENST00000503717 318 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 PGAM1P13-201ENST00000507497 754 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.79□□□□□ -1.64
CNOT4O95628 AC016065.2-201ENST00000514530 444 ntBASIC4.79□□□□□ -1.64
CNOT4O95628 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.79□□□□□ -1.64
CNOT4O95628 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms