Protein–RNA interactions for Protein: O43818

RRP9, U3 small nucleolar RNA-interacting protein 2, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9O43818 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RRP9O43818 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.56□□□□□ -1.68
RRP9O43818 AL139174.1-201ENST00000531489 886 ntBASIC4.56□□□□□ -1.68
RRP9O43818 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RRP9O43818 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC4.56□□□□□ -1.68
RRP9O43818 AC091489.2-201ENST00000566263 604 ntBASIC4.56□□□□□ -1.68
RRP9O43818 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.56□□□□□ -1.68
RRP9O43818 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.56□□□□□ -1.68
RRP9O43818 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.56□□□□□ -1.68
RRP9O43818 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.56□□□□□ -1.68
RRP9O43818 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.56□□□□□ -1.68
RRP9O43818 BNIP3P23-201ENST00000599655 511 ntBASIC4.56□□□□□ -1.68
RRP9O43818 AC079089.3-201ENST00000603094 673 ntBASIC4.56□□□□□ -1.68
RRP9O43818 AC080013.4-201ENST00000607624 649 ntBASIC4.56□□□□□ -1.68
RRP9O43818 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.56□□□□□ -1.68
RRP9O43818 AC025588.4-201ENST00000615802 908 ntBASIC4.56□□□□□ -1.68
RRP9O43818 SNORA11.6-201ENST00000619030 128 ntBASIC4.56□□□□□ -1.68
RRP9O43818 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RRP9O43818 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RRP9O43818 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RRP9O43818 AL133383.2-201ENST00000622958 2336 ntBASIC4.56□□□□□ -1.68
RRP9O43818 AL592148.3-201ENST00000608771 2646 ntBASIC4.56□□□□□ -1.68
RRP9O43818 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RRP9O43818 ZFRP1-201ENST00000457579 2970 ntBASIC4.56□□□□□ -1.68
RRP9O43818 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RRP9O43818 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.55□□□□□ -1.68
RRP9O43818 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.55□□□□□ -1.68
RRP9O43818 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.55□□□□□ -1.68
RRP9O43818 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RRP9O43818 RN7SKP15-201ENST00000364742 309 ntBASIC4.55□□□□□ -1.68
RRP9O43818 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RRP9O43818 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RRP9O43818 DEFB108C-201ENST00000400154 252 ntBASIC4.55□□□□□ -1.68
RRP9O43818 DHFRP6-201ENST00000401776 268 ntBASIC4.55□□□□□ -1.68
RRP9O43818 MTCYBP36-201ENST00000404146 440 ntBASIC4.55□□□□□ -1.68
RRP9O43818 MIR320C1-201ENST00000408566 88 ntBASIC4.55□□□□□ -1.68
RRP9O43818 AC007899.1-201ENST00000412776 775 ntBASIC4.55□□□□□ -1.68
RRP9O43818 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.55□□□□□ -1.68
RRP9O43818 AC017079.2-201ENST00000416102 485 ntBASIC4.55□□□□□ -1.68
RRP9O43818 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.55□□□□□ -1.68
RRP9O43818 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.55□□□□□ -1.68
RRP9O43818 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.55□□□□□ -1.68
RRP9O43818 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC4.55□□□□□ -1.68
RRP9O43818 BX323845.3-201ENST00000428215 527 ntBASIC4.55□□□□□ -1.68
RRP9O43818 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC4.55□□□□□ -1.68
RRP9O43818 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC4.55□□□□□ -1.68
RRP9O43818 AC019185.1-201ENST00000442718 389 ntBASIC4.55□□□□□ -1.68
RRP9O43818 MTCO1P27-201ENST00000448269 226 ntBASIC4.55□□□□□ -1.68
RRP9O43818 PAXBP1P1-201ENST00000449315 447 ntBASIC4.55□□□□□ -1.68
RRP9O43818 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.55□□□□□ -1.68
RRP9O43818 AC144530.1-201ENST00000452862 555 ntBASIC4.55□□□□□ -1.68
RRP9O43818 SSXP1-201ENST00000453640 473 ntBASIC4.55□□□□□ -1.68
RRP9O43818 RPS20P21-201ENST00000466859 343 ntBASIC4.55□□□□□ -1.68
RRP9O43818 AC017015.1-201ENST00000477387 286 ntBASIC4.55□□□□□ -1.68
RRP9O43818 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.55□□□□□ -1.68
RRP9O43818 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.55□□□□□ -1.68
RRP9O43818 AC106872.3-201ENST00000495104 446 ntBASIC4.55□□□□□ -1.68
RRP9O43818 AC090453.1-201ENST00000495560 436 ntBASIC4.55□□□□□ -1.68
RRP9O43818 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.55□□□□□ -1.68
RRP9O43818 POU5F1P7-201ENST00000508759 541 ntBASIC4.55□□□□□ -1.68
RRP9O43818 SNORD46.2-201ENST00000516021 102 ntBASIC4.55□□□□□ -1.68
RRP9O43818 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.55□□□□□ -1.68
RRP9O43818 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.55□□□□□ -1.68
RRP9O43818 AC112191.2-201ENST00000522428 333 ntBASIC4.55□□□□□ -1.68
RRP9O43818 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.55□□□□□ -1.68
RRP9O43818 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.55□□□□□ -1.68
RRP9O43818 AP004247.1-201ENST00000531556 1289 ntBASIC4.55□□□□□ -1.68
RRP9O43818 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.55□□□□□ -1.68
RRP9O43818 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.55□□□□□ -1.68
RRP9O43818 CR383656.6-201ENST00000550518 394 ntBASIC4.55□□□□□ -1.68
RRP9O43818 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.55□□□□□ -1.68
RRP9O43818 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.55□□□□□ -1.68
RRP9O43818 AC007599.1-201ENST00000568688 1174 ntBASIC4.55□□□□□ -1.68
RRP9O43818 TVP23CP2-201ENST00000571473 623 ntBASIC4.55□□□□□ -1.68
RRP9O43818 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.55□□□□□ -1.68
RRP9O43818 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.55□□□□□ -1.68
RRP9O43818 AL133338.2-201ENST00000604292 736 ntBASIC4.55□□□□□ -1.68
RRP9O43818 AC103710.4-201ENST00000609301 899 ntBASIC4.55□□□□□ -1.68
RRP9O43818 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.55□□□□□ -1.68
RRP9O43818 SNORA50A-202ENST00000629536 136 ntBASIC4.55□□□□□ -1.68
RRP9O43818 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RRP9O43818 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RRP9O43818 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RRP9O43818 AL590763.1-201ENST00000398297 1545 ntBASIC4.55□□□□□ -1.68
RRP9O43818 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
RRP9O43818 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.55□□□□□ -1.68
RRP9O43818 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RRP9O43818 IPO8P1-201ENST00000455509 3109 ntBASIC4.55□□□□□ -1.68
RRP9O43818 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RRP9O43818 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.54□□□□□ -1.68
RRP9O43818 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC4.54□□□□□ -1.68
RRP9O43818 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
RRP9O43818 AL391684.1-202ENST00000641293 1636 ntBASIC4.54□□□□□ -1.68
RRP9O43818 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
RRP9O43818 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.54□□□□□ -1.68
RRP9O43818 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RRP9O43818 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RRP9O43818 MTND5P29-201ENST00000458676 1807 ntBASIC4.54□□□□□ -1.68
RRP9O43818 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
RRP9O43818 RNU6-777P-201ENST00000364265 104 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms