Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 RPL21P40-201ENST00000428586 483 ntBASIC2.9□□□□□ -1.95
SGCEO43556 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.9□□□□□ -1.95
SGCEO43556 RPL21P110-201ENST00000433345 446 ntBASIC2.9□□□□□ -1.95
SGCEO43556 HMGB3P11-201ENST00000440127 604 ntBASIC2.9□□□□□ -1.95
SGCEO43556 COX6CP2-201ENST00000444980 225 ntBASIC2.9□□□□□ -1.95
SGCEO43556 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.9□□□□□ -1.95
SGCEO43556 RPS26P21-201ENST00000475397 348 ntBASIC2.9□□□□□ -1.95
SGCEO43556 SSR3-208ENST00000496050 579 ntTSL 4 BASIC2.9□□□□□ -1.95
SGCEO43556 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.9□□□□□ -1.95
SGCEO43556 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC2.9□□□□□ -1.95
SGCEO43556 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SGCEO43556 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC2.9□□□□□ -1.95
SGCEO43556 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC2.9□□□□□ -1.95
SGCEO43556 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC2.9□□□□□ -1.95
SGCEO43556 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC2.9□□□□□ -1.95
SGCEO43556 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SGCEO43556 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC2.9□□□□□ -1.95
SGCEO43556 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.9□□□□□ -1.95
SGCEO43556 AC005476.1-201ENST00000554427 397 ntBASIC2.9□□□□□ -1.95
SGCEO43556 EIF5A2P1-201ENST00000564027 460 ntBASIC2.9□□□□□ -1.95
SGCEO43556 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC2.9□□□□□ -1.95
SGCEO43556 MIR4276-201ENST00000584832 70 ntBASIC2.9□□□□□ -1.95
SGCEO43556 OR2BH1P-201ENST00000608850 864 ntBASIC2.9□□□□□ -1.95
SGCEO43556 uc_338.1-201ENST00000612113 180 ntBASIC2.9□□□□□ -1.95
SGCEO43556 AC006133.1-201ENST00000617106 264 ntBASIC2.9□□□□□ -1.95
SGCEO43556 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.9□□□□□ -1.95
SGCEO43556 AL109659.3-201ENST00000624985 950 ntBASIC2.9□□□□□ -1.95
SGCEO43556 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.9□□□□□ -1.95
SGCEO43556 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.9□□□□□ -1.95
SGCEO43556 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SGCEO43556 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC2.9□□□□□ -1.95
SGCEO43556 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.89□□□□□ -1.95
SGCEO43556 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
SGCEO43556 RNA5SP56-201ENST00000410277 118 ntBASIC2.89□□□□□ -1.95
SGCEO43556 RN7SKP58-201ENST00000411010 305 ntBASIC2.89□□□□□ -1.95
SGCEO43556 RNU6-272P-201ENST00000411028 104 ntBASIC2.89□□□□□ -1.95
SGCEO43556 RPS7P15-201ENST00000415804 584 ntBASIC2.89□□□□□ -1.95
SGCEO43556 RAD23BP2-201ENST00000416003 1207 ntBASIC2.89□□□□□ -1.95
SGCEO43556 RPS3AP9-201ENST00000417027 792 ntBASIC2.89□□□□□ -1.95
SGCEO43556 OR1AA1P-201ENST00000419597 916 ntBASIC2.89□□□□□ -1.95
SGCEO43556 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SGCEO43556 AC069157.1-201ENST00000421749 137 ntBASIC2.89□□□□□ -1.95
SGCEO43556 AC073508.1-201ENST00000428866 656 ntBASIC2.89□□□□□ -1.95
SGCEO43556 ETF1P3-201ENST00000430422 1160 ntBASIC2.89□□□□□ -1.95
SGCEO43556 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.89□□□□□ -1.95
SGCEO43556 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SGCEO43556 CST9LP2-201ENST00000437612 320 ntBASIC2.89□□□□□ -1.95
SGCEO43556 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.89□□□□□ -1.95
SGCEO43556 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC2.89□□□□□ -1.95
SGCEO43556 Z99127.3-201ENST00000448158 395 ntBASIC2.89□□□□□ -1.95
SGCEO43556 AC093392.2-201ENST00000450682 337 ntBASIC2.89□□□□□ -1.95
SGCEO43556 CYCSP35-201ENST00000451978 304 ntBASIC2.89□□□□□ -1.95
SGCEO43556 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.89□□□□□ -1.95
SGCEO43556 snoU13.4-201ENST00000458916 104 ntBASIC2.89□□□□□ -1.95
SGCEO43556 SNORA84-201ENST00000459229 133 ntBASIC2.89□□□□□ -1.95
SGCEO43556 RPL21P10-201ENST00000463521 490 ntBASIC2.89□□□□□ -1.95
SGCEO43556 AL672167.3-201ENST00000465951 960 ntBASIC2.89□□□□□ -1.95
SGCEO43556 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SGCEO43556 AC004062.1-201ENST00000509926 645 ntBASIC2.89□□□□□ -1.95
SGCEO43556 AC104057.1-201ENST00000515547 497 ntBASIC2.89□□□□□ -1.95
SGCEO43556 SNORA67.7-201ENST00000516664 135 ntBASIC2.89□□□□□ -1.95
SGCEO43556 SNORD59.2-201ENST00000516873 68 ntBASIC2.89□□□□□ -1.95
SGCEO43556 RNU6-711P-201ENST00000517255 106 ntBASIC2.89□□□□□ -1.95
SGCEO43556 AC104027.1-201ENST00000521887 300 ntBASIC2.89□□□□□ -1.95
SGCEO43556 CIR1P1-201ENST00000524055 1133 ntBASIC2.89□□□□□ -1.95
SGCEO43556 CASP1-212ENST00000531166 300 ntTSL 5 BASIC2.89□□□□□ -1.95
SGCEO43556 TRAV11-201ENST00000539512 339 ntBASIC2.89□□□□□ -1.95
SGCEO43556 AC007458.1-201ENST00000542812 373 ntBASIC2.89□□□□□ -1.95
SGCEO43556 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC2.89□□□□□ -1.95
SGCEO43556 AL355812.1-201ENST00000603215 216 ntBASIC2.89□□□□□ -1.95
SGCEO43556 AL162713.1-201ENST00000604480 262 ntBASIC2.89□□□□□ -1.95
SGCEO43556 DPRXP5-201ENST00000604662 539 ntBASIC2.89□□□□□ -1.95
SGCEO43556 AC068831.7-201ENST00000616954 363 ntBASIC2.89□□□□□ -1.95
SGCEO43556 AC092650.2-201ENST00000619984 902 ntBASIC2.89□□□□□ -1.95
SGCEO43556 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.89□□□□□ -1.95
SGCEO43556 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.89□□□□□ -1.95
SGCEO43556 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC2.89□□□□□ -1.95
SGCEO43556 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
SGCEO43556 Z83843.1-201ENST00000604070 3685 ntBASIC2.89□□□□□ -1.95
SGCEO43556 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
SGCEO43556 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SGCEO43556 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
SGCEO43556 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC2.88□□□□□ -1.95
SGCEO43556 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
SGCEO43556 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.88□□□□□ -1.95
SGCEO43556 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
SGCEO43556 RNU6ATAC34P-201ENST00000408879 121 ntBASIC2.88□□□□□ -1.95
SGCEO43556 BX323014.1-201ENST00000412876 237 ntBASIC2.88□□□□□ -1.95
SGCEO43556 AC109780.2-201ENST00000413467 845 ntBASIC2.88□□□□□ -1.95
SGCEO43556 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.88□□□□□ -1.95
SGCEO43556 MTCO3P12-201ENST00000416718 547 ntBASIC2.88□□□□□ -1.95
SGCEO43556 MRPL50P2-201ENST00000416821 482 ntBASIC2.88□□□□□ -1.95
SGCEO43556 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC2.88□□□□□ -1.95
SGCEO43556 AL139281.1-201ENST00000422120 335 ntBASIC2.88□□□□□ -1.95
SGCEO43556 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.88□□□□□ -1.95
SGCEO43556 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.88□□□□□ -1.95
SGCEO43556 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC2.88□□□□□ -1.95
SGCEO43556 AC005019.1-201ENST00000436455 431 ntBASIC2.88□□□□□ -1.95
SGCEO43556 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.88□□□□□ -1.95
SGCEO43556 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms