Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 RPL37P4-201ENST00000448908 268 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
SDCBPO00560 AC034236.1-201ENST00000469891 373 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 AC012181.1-201ENST00000479895 423 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 RPL23AP55-201ENST00000498163 452 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.42□□□□□ -2.02
SDCBPO00560 TMEM248P1-201ENST00000510579 951 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC2.42□□□□□ -2.02
SDCBPO00560 GMPSP1-201ENST00000514075 579 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.42□□□□□ -2.02
SDCBPO00560 PSMA2P1-201ENST00000526365 646 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SDCBPO00560 AP002404.1-201ENST00000532005 451 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 AP000857.1-201ENST00000532151 543 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.42□□□□□ -2.02
SDCBPO00560 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SDCBPO00560 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.42□□□□□ -2.02
SDCBPO00560 OR6C73P-201ENST00000546432 358 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC2.42□□□□□ -2.02
SDCBPO00560 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.42□□□□□ -2.02
SDCBPO00560 AL163153.1-201ENST00000554223 283 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.42□□□□□ -2.02
SDCBPO00560 CENPUP2-201ENST00000555897 1186 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 AC023158.1-201ENST00000561632 1025 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 AC034268.2-201ENST00000571784 482 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 AC053481.3-201ENST00000577881 843 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC2.42□□□□□ -2.02
SDCBPO00560 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.42□□□□□ -2.02
SDCBPO00560 AC024220.1-201ENST00000603675 484 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SDCBPO00560 AC010338.1-201ENST00000621823 717 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 AC091953.5-201ENST00000622919 233 ntBASIC2.42□□□□□ -2.02
SDCBPO00560 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SDCBPO00560 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.41□□□□□ -2.02
SDCBPO00560 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SDCBPO00560 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC2.41□□□□□ -2.02
SDCBPO00560 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.41□□□□□ -2.02
SDCBPO00560 AC000403.1-201ENST00000613696 3585 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 MIR422A-201ENST00000362286 90 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 RNA5SP374-201ENST00000362939 125 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 MIR607-201ENST00000385241 96 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 SNORA26.7-201ENST00000391288 122 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 DNAJC19P6-201ENST00000401853 280 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 AL590290.1-201ENST00000405336 380 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 AL355379.1-201ENST00000405542 640 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 AL512649.1-201ENST00000428997 581 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC2.41□□□□□ -2.02
SDCBPO00560 ARL5AP3-201ENST00000439327 386 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.41□□□□□ -2.02
SDCBPO00560 RPL29P29-201ENST00000448725 423 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 AC112492.1-201ENST00000449607 712 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 HMGN2P16-201ENST00000456802 261 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 RPS27AP1-201ENST00000475545 471 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 RPS27AP9-201ENST00000477681 438 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 RN7SL499P-201ENST00000481141 276 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 AC103975.1-201ENST00000482506 483 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 PANCR-201ENST00000503456 493 ntTSL 5 BASIC2.41□□□□□ -2.02
SDCBPO00560 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.41□□□□□ -2.02
SDCBPO00560 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC2.41□□□□□ -2.02
SDCBPO00560 RN7SKP277-201ENST00000516895 283 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 H3F3AP1-201ENST00000559984 334 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.41□□□□□ -2.02
SDCBPO00560 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC2.41□□□□□ -2.02
SDCBPO00560 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC2.41□□□□□ -2.02
SDCBPO00560 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.41□□□□□ -2.02
SDCBPO00560 AC006539.2-201ENST00000601729 572 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 AC007566.2-201ENST00000603642 413 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 AC124312.4-201ENST00000605533 310 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 AL137246.1-201ENST00000607072 977 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 OR2BH1P-201ENST00000608850 864 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 AC022079.2-201ENST00000619739 566 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 AC022509.4-201ENST00000621404 572 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 FRG1DP-201ENST00000635586 771 ntBASIC2.41□□□□□ -2.02
SDCBPO00560 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
SDCBPO00560 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC2.41□□□□□ -2.02
SDCBPO00560 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.4□□□□□ -2.02
SDCBPO00560 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.4□□□□□ -2.02
SDCBPO00560 AC002546.1-201ENST00000588041 2504 ntBASIC2.4□□□□□ -2.02
SDCBPO00560 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
SDCBPO00560 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
SDCBPO00560 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.4□□□□□ -2.03
SDCBPO00560 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SDCBPO00560 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.4□□□□□ -2.03
SDCBPO00560 OR52E6-202ENST00000379946 954 ntBASIC2.4□□□□□ -2.03
SDCBPO00560 RPL23AP47-201ENST00000408017 460 ntBASIC2.4□□□□□ -2.03
SDCBPO00560 RNU2-21P-201ENST00000410368 188 ntBASIC2.4□□□□□ -2.03
SDCBPO00560 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.4□□□□□ -2.03
SDCBPO00560 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.4□□□□□ -2.03
SDCBPO00560 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.4□□□□□ -2.03
SDCBPO00560 HIGD1AP11-201ENST00000438361 280 ntBASIC2.4□□□□□ -2.03
SDCBPO00560 AL627224.1-201ENST00000448334 444 ntBASIC2.4□□□□□ -2.03
SDCBPO00560 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.4□□□□□ -2.03
SDCBPO00560 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.4□□□□□ -2.03
SDCBPO00560 AC112229.2-201ENST00000456683 476 ntTSL 5 BASIC2.4□□□□□ -2.03
SDCBPO00560 RPS15AP1-201ENST00000457423 391 ntBASIC2.4□□□□□ -2.03
SDCBPO00560 AC096992.1-201ENST00000459808 709 ntBASIC2.4□□□□□ -2.03
SDCBPO00560 RN7SL297P-201ENST00000483161 293 ntBASIC2.4□□□□□ -2.03
SDCBPO00560 RPS4XP13-201ENST00000483219 789 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms