Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 RN7SKP116-201ENST00000516902 319 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC090136.1-201ENST00000520009 240 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 AP003102.1-201ENST00000525638 661 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 OR5AK3P-201ENST00000527486 1297 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 LARP7P3-201ENST00000579888 337 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC012254.4-201ENST00000588843 273 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL162713.1-201ENST00000604480 262 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC124312.4-201ENST00000605533 310 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL391834.1-201ENST00000609609 560 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 MIR4278-201ENST00000636094 69 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC138649.5-201ENST00000637456 137 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 ELL2P4-201ENST00000446870 1376 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 PWAR6-201ENST00000552334 4618 ntBASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.19□□□□□ -1.9
TMX2-CTNND1H3BSU7 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC092326.2-201ENST00000624772 1561 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 RNU6-7-201ENST00000364784 107 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 RNU6-8-201ENST00000365467 107 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL357075.1-201ENST00000404107 726 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 HSPE1P26-201ENST00000405341 275 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 ATF1P1-201ENST00000406040 927 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 MTND4P11-201ENST00000417020 1058 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 COTL1P1-201ENST00000422309 375 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 FO393414.1-201ENST00000428697 1184 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 RPL23AP69-201ENST00000431134 458 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC127537.2-201ENST00000439258 465 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC008264.1-201ENST00000447612 367 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AP001486.1-201ENST00000463339 476 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL049873.1-201ENST00000480540 376 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC011825.1-201ENST00000484967 388 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC118282.1-201ENST00000506408 765 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC119751.1-201ENST00000513357 765 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 MTCO3P27-201ENST00000514397 196 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 RNA5SP341-201ENST00000516261 117 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 MIR548Y-201ENST00000582739 110 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC133794.1-201ENST00000602731 914 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC110792.4-201ENST00000609843 298 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC055764.2-201ENST00000610089 670 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC005858.4-201ENST00000623191 700 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC110801.1-201ENST00000623590 212 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC024023.1-201ENST00000624530 922 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC127502.3-201ENST00000636170 1206 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC083865.1-201ENST00000636634 831 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL672296.1-201ENST00000427780 2158 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL136520.1-201ENST00000600311 1322 ntBASIC3.18□□□□□ -1.9
TMX2-CTNND1H3BSU7 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC093831.2-201ENST00000624393 3427 ntBASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 RNU6-354P-201ENST00000383862 107 ntBASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 RNU6-98P-201ENST00000384173 107 ntBASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 RNU6-610P-201ENST00000384264 107 ntBASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 RPL31P52-201ENST00000407532 367 ntBASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC007899.1-201ENST00000412776 775 ntBASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC013404.1-201ENST00000413068 249 ntBASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 HMGB3P23-201ENST00000414981 585 ntBASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL513174.1-201ENST00000423182 629 ntBASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 RPL30P3-201ENST00000424262 333 ntBASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 ISCA1P2-201ENST00000438679 421 ntBASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL831737.1-201ENST00000441288 271 ntBASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 PTGES3P5-201ENST00000455109 434 ntBASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 RPL21P18-201ENST00000469899 480 ntBASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 AP002884.2-201ENST00000471647 395 ntBASIC3.17□□□□□ -1.9
TMX2-CTNND1H3BSU7 RPL7P38-201ENST00000488396 739 ntBASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms