Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 RNU6-956P-201ENST00000458868 103 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 RNA5SP246-201ENST00000458909 119 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AC022447.1-201ENST00000515358 464 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 IGHV3-32-201ENST00000519182 355 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AP003033.1-201ENST00000527244 415 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AC091489.2-201ENST00000566263 604 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AC006362.1-201ENST00000567392 174 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AC012213.3-201ENST00000577199 777 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AC012417.1-201ENST00000582307 1039 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 MAGOH2P-202ENST00000584384 429 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 RPL23AP92-201ENST00000603609 255 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AC104662.1-201ENST00000604448 511 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AC068276.1-201ENST00000605793 379 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AL159169.3-201ENST00000608871 561 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 MIR7151-201ENST00000617477 60 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AC025048.6-202ENST00000627667 438 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 CYP3A51P-201ENST00000633513 256 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 PABPC1P9-201ENST00000426076 1612 ntBASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.16□□□□□ -1.74
TCRBV7S3A2A0A539 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
TCRBV7S3A2A0A539 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
TCRBV7S3A2A0A539 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
TCRBV7S3A2A0A539 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.15□□□□□ -1.74
TCRBV7S3A2A0A539 IQCB2P-201ENST00000401788 1633 ntBASIC4.15□□□□□ -1.74
TCRBV7S3A2A0A539 ANKRD62P1-201ENST00000434304 1623 ntBASIC4.15□□□□□ -1.74
TCRBV7S3A2A0A539 RNU6-952P-201ENST00000391164 108 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 RN7SKP266-201ENST00000410232 287 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 CHIAP3-201ENST00000423668 1133 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 COX6B1P7-201ENST00000430845 235 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 RPL23AP46-201ENST00000438548 490 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AL831737.1-201ENST00000441288 271 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 MTND5P14-201ENST00000441481 1267 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AL591623.2-201ENST00000449978 222 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 snoU13.1-201ENST00000459157 104 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 PABPC1P3-201ENST00000469174 459 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 RPL31P50-201ENST00000471002 296 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AL136126.1-201ENST00000473603 402 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AC087385.1-201ENST00000475062 312 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AC007686.1-201ENST00000488511 463 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AC021678.1-201ENST00000505195 936 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AC099522.1-202ENST00000514718 367 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AC092470.1-201ENST00000546187 132 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AC067852.4-201ENST00000590314 478 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AC012065.4-201ENST00000602445 679 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AC068790.4-201ENST00000602474 263 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AL357080.1-201ENST00000617394 239 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AC011944.2-201ENST00000624440 683 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AP000843.1-201ENST00000624880 701 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AL133243.3-201ENST00000617415 3004 ntBASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
TCRBV7S3A2A0A539 MTND4P16-201ENST00000466108 1367 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 SNORD35B-201ENST00000363660 87 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 RNA5SP509-201ENST00000364577 119 ntBASIC4.14□□□□□ -1.75
TCRBV7S3A2A0A539 Y_RNA.505-201ENST00000384489 102 ntBASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms